Protein

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Genbank accession
QPX65155.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MINYGNSNIKEIINGSVKILTESKTYTVGGGGRFSKLSDALAKALEYISVKNNCNINIILKSGYKLNEQIILRNALANHINILSEDDEILLDNFDTEKYIFMFYGCKAPNIKIMVNAIGTKAKGWYFRESSVIMVPSTSNAYKYGIKNCYKNAVISLSSKIVISKYSFTNNGNNLDGTQEQSLLYCNDQGELTGFDLKLDNNGSENCNGWLYYCGYGSKMTLTNSSITNNKSAANILNNNNSYMNLQYP
Physico‐chemical
properties
protein length:249 AA
molecular weight: 27745,13670 Da
isoelectric point:8,57721
aromaticity:0,10442
hydropathy:-0,31606

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPX65155.1
1 249
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,9237
Central domain 35 238 205 0,9883
C-terminal 239 249 10 0,2191
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-238
C-terminal
239-249

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage F371
[NCBI] 		2794374 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX65155.1 [NCBI]
Genbank nucleotide accession
MT863728.1 [NCBI]
CDS location
range 28898 -> 29647
strand -
CDS
ATGATAAATTATGGAAATTCAAATATAAAAGAAATAATTAATGGTAGTGTTAAAATATTAACAGAGAGCAAAACTTATACAGTAGGGGGTGGGGGGAGGTTCTCCAAATTATCAGATGCTTTAGCAAAAGCACTAGAATATATTTCAGTTAAAAATAATTGCAACATAAATATTATATTAAAATCAGGATATAAATTAAACGAACAAATTATCTTAAGAAATGCATTAGCAAATCATATAAATATATTATCAGAAGATGATGAAATATTGCTTGATAATTTTGATACCGAAAAGTATATCTTTATGTTTTATGGTTGCAAAGCACCTAATATTAAAATTATGGTTAATGCTATAGGAACTAAAGCAAAAGGATGGTACTTTAGAGAAAGTTCTGTTATTATGGTTCCTTCAACATCTAATGCATACAAATATGGTATTAAAAATTGTTATAAAAATGCAGTTATATCATTATCTTCTAAAATCGTTATATCTAAATATAGCTTTACCAACAATGGTAACAATTTAGATGGAACACAAGAGCAATCATTATTATATTGTAATGATCAAGGTGAATTAACGGGATTTGATTTAAAATTAGATAATAATGGTAGTGAAAACTGTAATGGATGGTTATATTATTGTGGATATGGTTCTAAAATGACATTAACTAATTCATCAATTACAAATAATAAATCTGCTGCTAATATATTAAATAATAACAATTCTTATATGAATCTACAATATCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c64c2b6501f62abe15f3625e69b99f59af6b303e7b28af9c523831fbecce37ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8480
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50