Protein

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Genbank accession
WVX87468.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSNIGTNITKHVLDEAGKVGFTVAGTPFPVGTENVQQALNLIDASALFPAPSVPYATQQVEGAVRFATPAELAGLELQTVALSPSHLGQYQTAITPATTDQQGLLKLSNALLMGINTTNVDTAVTPGRLSHWATQIRIATETSAGLAKLATLAEALDATNNTNTMTPAKVIASVNKWSIKRPDATTTVKGGIRLATPNEVKYNARSVAVTPKSLQNKTASAYSRGLFTINEVITPGNMASFAASDTVQGFFTLEDTLTSSATNVALTAAQGLEIQANKIGLTGGRIEGTLECNGFNTEIIKLVKVNITGGWVYQKQTISATAVTPDGYINPEIGTLGRPVGSLYMSTSSMDPATLFGGRWTRINGRTLVGAGSTTDTRGERRTFRGSSTGGSYRTKLTESQIPEHKHAQWGESSYFLNQWKFGHAPQYGRNRLGGGSTDTDNYLYYNSPVGNSQPHNNTQPYTALYMWRRIS
Physico‐chemical
properties
protein length:472 AA
molecular weight: 50403,94940 Da
isoelectric point:9,28295
aromaticity:0,07415
hydropathy:-0,27331

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
SSF88874
STR
339–470
SSF88874
IPR053827
ATT
339–471
IPR053827
IPR044916
STR
360–465
IPR044916
WVX87468.1
1 472
Architecture
STR
ATT
STR 1-338 | ATT 339-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage EniLVp02
[NCBI] 		3116828 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX87468.1 [NCBI]
Genbank nucleotide accession
PP209424 [NCBI]
CDS location
range 91602 -> 93020
strand -
CDS
ATGTCAAATATAGGCACCAACATTACAAAGCACGTCCTTGATGAAGCTGGAAAAGTAGGGTTTACCGTTGCCGGTACTCCCTTTCCAGTAGGGACTGAAAACGTTCAACAGGCACTTAACCTGATTGACGCCTCGGCGCTGTTCCCGGCTCCATCGGTGCCGTATGCGACACAACAGGTAGAAGGGGCAGTTAGATTTGCAACACCCGCAGAACTGGCAGGATTGGAGTTACAGACTGTTGCACTTTCTCCTTCTCACTTGGGACAGTACCAAACAGCCATTACCCCGGCGACCACAGACCAACAGGGCTTGTTGAAACTTTCTAATGCCCTGCTTATGGGAATCAACACGACCAACGTCGACACGGCAGTCACGCCGGGAAGGTTATCACACTGGGCAACTCAGATCCGGATTGCGACGGAGACGTCGGCAGGTCTGGCAAAATTGGCAACATTAGCCGAAGCACTGGACGCCACCAACAACACCAATACCATGACACCGGCTAAGGTGATCGCTTCGGTGAATAAGTGGAGTATCAAGCGCCCGGATGCGACAACAACTGTCAAAGGTGGGATTCGACTTGCAACGCCTAATGAGGTGAAATACAATGCCCGGTCGGTTGCGGTAACCCCGAAATCATTGCAGAATAAAACAGCCTCGGCGTATTCGCGTGGGTTGTTTACGATCAATGAAGTAATTACGCCCGGAAACATGGCTTCATTCGCAGCCAGTGACACCGTACAAGGATTTTTCACCCTTGAGGATACACTGACCTCAAGTGCAACCAACGTCGCTCTAACTGCCGCTCAGGGGCTTGAAATACAGGCTAATAAAATTGGTCTAACCGGTGGGCGAATAGAGGGCACATTGGAATGTAACGGATTCAATACCGAGATCATTAAACTGGTCAAGGTGAATATTACCGGCGGGTGGGTATATCAGAAGCAAACCATATCCGCGACGGCTGTCACCCCAGACGGTTATATCAATCCGGAGATTGGGACACTCGGGCGCCCGGTTGGGTCATTATATATGTCCACGTCTTCTATGGATCCGGCAACACTCTTTGGCGGTCGCTGGACACGAATCAATGGGCGGACATTGGTTGGCGCTGGGTCGACAACAGACACCCGAGGCGAACGTCGCACCTTTAGAGGTAGTTCAACCGGTGGCAGCTATCGAACCAAGCTAACCGAGTCTCAAATACCCGAGCATAAACATGCTCAATGGGGCGAGTCATCATACTTCCTAAACCAATGGAAGTTTGGACATGCTCCCCAATATGGACGTAACCGACTGGGCGGTGGTTCGACCGATACCGATAACTACCTGTACTATAACAGCCCAGTGGGCAACAGTCAACCCCATAATAACACACAACCTTATACAGCTCTGTATATGTGGAGACGGATATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4b19228c35a30fd17f11c73b62276e8cfdc732ded9614833105cf1f0d9dfe3b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50