Protein

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Genbank accession
QDH84234.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MPWKTMTLRGVKGSPLTNAEMDANLSTVLDFMNGVLLPQTAHDLNDYDVPGVYGQNATAGAVAGSNYPIDPIAGTPVAGVLYVHKGSPSDTSNISCQQEYKTYYNSNSTIFYRNRSSAGVWGAWVRIPKFDETLTSVMLSVATDANTLIAGNTRYLWTNGAVVNNGTNWPAMAAVARGMLEVIAFAPSQVYQRLTLPIAADGHPIIFERYGNPGTSWYAWRIAGPISSTTWLPTQNYGDVYVDGDGWYTWSGSTYNRARVAKVLPTTAHDLNTYTIPDVWWQNQSSAATLANNYPAEGITCFLEVKNFGNATLQEVSGRTTPFRKWWRMQTGASTWSAWKEYADMGSAMTHVFLTTATDANTMVLDNTFYTWTNSGALGANFPAFSTAWPSAGYMRVYYGAAAQVSQELTFLITGQKPRTFFRFGNSTTGAWQPWKSTSAWHVAVGFPTSDMGDIYVDGDGWYAWNGSSYVHRRTKITTRTDSLDLMDFAMGGLAANGAIIEQGSNANGIWIKFGDGTMLCVIATVLNLTGATFTSNGAFSYFAVGGTIAIPAAFAGAPVIVAASFSDNDIGSRACYLGSVGIATTTTVSGMYLVSPNPSLGAVGSSGVLRYLLLGAWK
Physico‐chemical
properties
protein length:619 AA
molecular weight: 66788,17300 Da
isoelectric point:6,17473
aromaticity:0,12763
hydropathy:-0,04863

Domains

Domains [InterPro]
DC_1584
STR
21–215
DC_1584 DC_1584 DC_1584
cd19958
STR
40–127
cd19958 cd19958 cd19958
QDH84234.1
1 619
Architecture
STR
STR
STR 21-434 | STR 437-606 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH84234.1
1 619
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,3914
Central domain 216 414 200 0,0882
C-terminal 415 619 204 0,9645
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-414
C-terminal
415-619

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyS_19-32_Axy14
[NCBI] 		2591050 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH84234.1 [NCBI]
Genbank nucleotide accession
MK962633.1 [NCBI]
CDS location
range 17655 -> 19514
strand +
CDS
ATGCCATGGAAGACTATGACTCTTCGCGGGGTCAAGGGCTCGCCTCTTACCAACGCGGAGATGGACGCCAACCTCAGCACCGTTCTGGATTTCATGAACGGTGTATTGCTACCACAAACTGCGCACGACCTCAACGACTATGACGTTCCAGGAGTGTACGGGCAGAACGCTACGGCTGGCGCCGTTGCGGGTAGCAACTACCCAATTGATCCAATTGCGGGCACTCCGGTAGCTGGTGTTTTGTATGTTCATAAAGGATCACCGAGCGATACGAGCAATATTTCCTGCCAACAAGAATACAAAACCTACTATAACTCTAACTCGACCATCTTCTACCGTAACCGCAGTAGCGCCGGGGTATGGGGCGCTTGGGTGCGTATCCCTAAGTTCGATGAAACTCTGACCAGCGTAATGCTCAGCGTTGCGACGGATGCCAATACCCTTATCGCGGGAAATACCCGCTATTTGTGGACCAACGGCGCCGTGGTTAACAATGGAACCAACTGGCCAGCAATGGCGGCTGTGGCTCGTGGAATGTTGGAGGTGATAGCATTTGCCCCCTCTCAAGTCTATCAACGGCTTACTTTGCCTATTGCAGCAGATGGCCATCCTATCATTTTCGAACGGTATGGTAATCCCGGTACCAGTTGGTATGCCTGGCGAATTGCTGGTCCTATCAGCTCTACCACTTGGCTCCCTACACAAAACTACGGCGATGTTTACGTTGATGGAGACGGCTGGTACACGTGGAGCGGTTCGACTTATAACCGCGCTCGCGTGGCCAAAGTTCTACCGACAACCGCCCACGATCTGAATACCTATACGATCCCCGATGTTTGGTGGCAGAACCAGTCGTCGGCTGCGACGTTGGCCAACAATTATCCGGCAGAAGGTATAACGTGCTTCCTAGAAGTTAAGAATTTCGGGAACGCAACGCTACAGGAAGTCAGCGGGCGTACCACGCCATTCCGAAAATGGTGGCGGATGCAAACTGGGGCGTCGACTTGGTCTGCGTGGAAAGAATATGCTGATATGGGTAGTGCCATGACCCATGTCTTCCTAACTACTGCAACCGATGCCAACACCATGGTTTTGGACAACACGTTTTATACGTGGACCAACTCCGGGGCTCTAGGTGCAAATTTCCCAGCCTTTTCTACCGCATGGCCCTCCGCTGGGTACATGCGTGTGTACTATGGGGCCGCGGCACAAGTTAGCCAAGAACTGACTTTCCTCATTACAGGGCAGAAACCGCGCACGTTTTTCCGATTTGGAAATTCAACCACCGGAGCGTGGCAACCTTGGAAATCCACCAGCGCATGGCACGTGGCTGTTGGCTTTCCGACTTCTGACATGGGAGACATTTACGTTGACGGTGATGGCTGGTACGCCTGGAACGGCAGCTCGTATGTGCATAGACGTACAAAAATAACTACTCGTACTGATTCTCTTGACCTCATGGATTTTGCCATGGGAGGTTTGGCAGCCAATGGTGCCATTATTGAACAAGGCAGTAATGCTAATGGTATATGGATTAAGTTTGGCGATGGGACAATGTTGTGCGTAATTGCCACCGTATTGAATCTCACCGGAGCCACGTTCACTTCCAATGGAGCTTTTTCTTATTTCGCCGTAGGTGGGACTATTGCGATCCCAGCAGCTTTCGCTGGAGCACCCGTTATCGTCGCTGCTTCATTTTCCGATAATGATATAGGTAGCCGAGCTTGTTACTTAGGAAGCGTGGGTATAGCTACGACCACTACAGTGTCAGGTATGTACCTAGTATCCCCTAATCCTTCTCTGGGGGCGGTTGGAAGTTCTGGTGTCCTCCGTTATCTGCTTTTGGGAGCTTGGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2a10dd84cc686134db89bf96089fbacb8dd636a6bd50aa4dc28d6e1e150d26d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank