Protein

View in Explore
Genbank accession
BDR26739.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MARFKNPETIHVADGVEAVFSLDFPFLRREDVFVQVDKILVTDYTWVDDTNIQLAVVPKKDQEVRIFRDTPAQVPDTQFSQGIPFLPRYIDANNKQLLYAVQEGINTANLALDGVLDAIRIAEEARRLAQEALDAANEALRRALGFAEIRTVTEDSDIDPSWRGYWNRCITTDKSLTLTMQMEDPDEPWIEFSEVHFEQAGIRDLNIVAGPGVTINRLQNTTMQLYGENGVCTLKRIGPNHWIIFGAMEDE
Physico‐chemical
properties
protein length:251 AA
molecular weight: 28499,79390 Da
isoelectric point:4,55959
aromaticity:0,08765
hydropathy:-0,28287

Domains

Domains [InterPro]
IPR005604
ATT
12–117
IPR005604 Coil
DC_0220
STR
12–251
DC_0220
BDR26739.1
1 251
Architecture
ATT
STR
ATT 12-117 | STR 118-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. LP
[NCBI] 		2972145 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26739.1 [NCBI]
Genbank nucleotide accession
LC727700.1 [NCBI]
CDS location
range 31057 -> 31812
strand +
CDS
GTGGCTCGGTTCAAGAATCCCGAGACCATCCACGTTGCAGATGGGGTCGAGGCTGTCTTCAGTCTCGACTTCCCGTTCCTGCGGCGTGAGGACGTGTTCGTCCAGGTCGATAAGATACTCGTCACCGACTATACGTGGGTAGACGACACCAACATTCAATTGGCCGTGGTGCCGAAGAAGGATCAAGAGGTCCGCATCTTCCGCGACACGCCCGCCCAGGTCCCGGACACTCAGTTCAGCCAGGGCATCCCGTTCCTGCCTCGGTACATCGACGCGAACAACAAGCAGTTGCTGTACGCTGTGCAGGAGGGCATCAACACCGCGAACCTCGCACTCGACGGAGTTCTCGACGCGATCCGTATCGCCGAGGAAGCCCGCCGCCTTGCACAGGAAGCACTCGACGCCGCTAACGAAGCGCTGCGCCGTGCCCTGGGCTTCGCTGAGATTCGCACCGTTACGGAAGACTCGGACATTGATCCGAGCTGGCGTGGTTACTGGAACCGCTGCATCACCACCGACAAGTCCCTGACCCTGACCATGCAAATGGAGGACCCGGACGAGCCGTGGATCGAGTTCAGCGAAGTCCACTTCGAACAGGCCGGTATTCGTGATCTCAACATCGTGGCAGGCCCTGGCGTGACCATCAACCGTTTGCAGAACACCACCATGCAGCTCTACGGCGAGAATGGCGTGTGTACCCTCAAGCGCATCGGCCCTAACCACTGGATCATCTTCGGGGCGATGGAGGACGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
582cd88f27628dc6d897953b649016434746437a74276ad703fa97c33afeea74
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9109
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage LP Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank