Protein

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Genbank accession
XHY53858.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVRAQPGMDLGRHHYLGMFIEIMPVQSTGFLICIKYSIMNKGGNMLPFARMVKYGNIAPAPSVVRKISTSISHVGMLFDNGNLYLRGAGVEYKLGNDSTGFVQDRWIKCPYSVADVWCLTYATIILTTSGELYLAGQMGYVGVVATSGPGWTNITTILSSIPGLSTIQNIASTESTTTNGAILILLSSGDLYGIGRNGAGVLGVSGIQSTPIKIDTGVTLIAGTDRAAAFHYVKNGQYYRCGSNARYNLGTSSSSLSTFTVSSDIFGSVLGIACTTNATSVLTSYNGTIRVYSAGQNTDYTLGIGYGDTSIIMSPFSMTPTIYGIVPDVGSLNNSCINAHMIAMTQGGKLYTCGNGVALGREITSSTPRTAYYPVLFEDSVTAPAVQAFSVQGSSGVLYALVGANEVYWCGSGSMFQEQSAGTQQVKMKKMILPE
Physico‐chemical
properties
protein length:435 AA
molecular weight: 46026,09430 Da
isoelectric point:8,30838
aromaticity:0,09195
hydropathy:0,18759

Domains

Domains [InterPro]
DC_0433
ATT
25–179
DC_0433 IPR009091
IPR009091
STR
49–266
IPR009091
IPR009091
STR
61–319
IPR009091
IPR051553
Unmapped
114–309
IPR051553
DC_0433
ATT
158–281
DC_0433
XHY53858.1
1 435
Architecture
ATT
STR
ATT 25-281 | STR 282-433 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHY53858.1
1 435
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,0557
Central domain 60 271 213 0,3730
C-terminal 272 435 163 0,5001
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-271
C-terminal
272-435

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JP4
[NCBI] 		3349802 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY53858.1 [NCBI]
Genbank nucleotide accession
PQ330092 [NCBI]
CDS location
range 108296 -> 109603
strand -
CDS
ATGGTGCGAGCACAACCAGGTATGGATTTAGGAAGACACCATTACCTTGGGATGTTTATTGAAATTATGCCAGTACAAAGTACTGGCTTTCTTATTTGTATTAAATATAGTATAATGAATAAAGGAGGGAATATGTTACCTTTTGCAAGAATGGTTAAGTACGGGAATATTGCACCTGCTCCCAGTGTAGTGCGAAAGATTAGTACTTCCATTAGTCACGTTGGTATGTTATTCGATAATGGGAATTTATATCTACGTGGTGCTGGTGTGGAATATAAGTTAGGAAATGACAGTACTGGATTCGTTCAGGATAGGTGGATTAAATGTCCATATAGTGTTGCTGATGTTTGGTGCTTAACTTACGCGACTATTATACTTACTACAAGTGGTGAATTATACTTAGCTGGTCAGATGGGTTATGTTGGTGTAGTTGCAACCAGCGGTCCTGGGTGGACTAATATTACAACAATATTATCTTCAATTCCAGGACTTAGTACTATACAAAATATAGCTTCTACCGAGTCTACAACTACCAATGGTGCTATATTAATTTTGTTAAGTAGCGGGGACTTATATGGTATAGGTCGTAATGGTGCTGGTGTATTAGGCGTTTCTGGAATCCAATCAACACCTATTAAGATTGACACCGGAGTTACTTTAATTGCAGGCACAGACCGTGCAGCGGCGTTTCATTATGTGAAAAACGGTCAGTACTACAGATGTGGTAGCAATGCTAGATACAACCTAGGAACAAGCTCTTCTAGTTTATCTACATTCACAGTAAGTTCAGATATATTTGGTTCAGTACTGGGTATTGCATGTACGACAAATGCGACGTCAGTACTAACTTCATATAATGGTACTATTAGAGTGTATAGTGCTGGACAAAACACGGATTATACTTTAGGTATTGGTTATGGAGACACCAGTATAATAATGAGTCCATTTAGTATGACACCTACAATTTATGGTATTGTACCAGATGTGGGTTCGCTGAATAATTCTTGTATTAATGCTCATATGATTGCGATGACTCAGGGTGGCAAATTATATACTTGTGGTAATGGTGTTGCTCTTGGTAGAGAAATAACTTCATCGACACCTAGAACTGCGTACTACCCAGTACTATTTGAGGATTCCGTTACTGCACCGGCTGTTCAGGCGTTTTCAGTTCAGGGTAGTTCCGGTGTGTTATACGCATTAGTGGGGGCAAATGAGGTGTACTGGTGTGGTAGTGGTTCTATGTTCCAGGAACAGAGTGCAGGTACACAACAAGTTAAAATGAAGAAAATGATTTTACCGGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
16ec89b09ee49b9907485c31e061d528f3158a67b9a3194d75e012420eb7b999
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel jumbo phage JP4 with potential to control drug-resistant pathogenic Escherichia coli Zhang,K., Wei,X., He,B., Liao,J., Wang,J., Le,S. and Lu,S. 2025-11-25 — GenBank