Protein

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Genbank accession
WKV23775.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MGKVIVALAGAAMMAVGAVTGNYYLIAAGMAMNTANQLLAKKPKIETYRDQSERKQMLRSAVAPENVVIGKTVVSGLLMFAEEEPGEQQDGEWVHLVIVLAGHPIERIGRIWLGDDLISTFEDYATWELHNDRSTCDPFMLEKCPSWKEDMIGKGLAWLRVSLKFNAEKFPYGLPNIKAEVWGKKLYDPRTGMTEWSNNLALGVLDYYRSVLKVPDTEINWEQFKEAANICAELIVNPENQYEARYTMNGSFDLSETPSSLLESMHLCCAGEPTYIAGQHGILVGAYYGPPQLTLNEHQMADSVQITTETSMRDATNAIYGTFVDWEQQSTKIDFTPVRVNEWIVEDGLEIKEDVDLRFIDTPYQSQRVANILLRRKRAGRVVVAKTNLSGYAYRPGAVIKLDMPSIGVKESEFRVTGWRFSMTGGAELTLQEESAEFYDDAIGEPFTRPPFTQLPTGGPASPIGLQLLNETVGDIVQGVLAWTNIGSISYNNITVYHSDGTVVFTAQVPGNNLQLSGLPSGPYMAQVRAVSVIGVQSSPAGISFVIEPPPVPVGVDVTAGNWSLILIPRFNGVTTIGTLCEFWYYTEDMPIDEVTTRAKFVGTGVSMSHSGLMQNTTYFYWVRGINNYGKSAFFRVEAKTTYDPSSIVELLDGEIGAEQLREELRKPLEETIDMWTAKVGNDHIAGGIGLTIETDDDGKERIKCIVDADLFAIVNRNNNTNINPFVVKDGTVYINHLMVDNAEIGEIIAKYINVQHLVGTLIEGSTIKGSQITGTNIYGSTITGTTLNANTINGGSINIANLFRVDANGNIIMQATADTVGMKITNQTISVYRGPGDRAVAMGWIG
Physico‐chemical
properties
protein length:847 AA
molecular weight: 93091,64130 Da
isoelectric point:4,85646
aromaticity:0,08737
hydropathy:-0,11216

Domains

Domains [InterPro]
DC_0187
STR
1–836
DC_0187
IPR053171
Unmapped
500–665
IPR053171 IPR015406
IPR057587
ATT
552–652
IPR057587
IPR036116
STR
593–648
IPR036116
WKV23775.1
1 847
Architecture
STR
ATT
STR
STR 1-551 | ATT 552-652 | STR 653-836 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKV23775.1
1 847
Domain Start End Length (AA) Confidence
N-terminal 1 115 115 0,6193
Central domain 116 314 200 0,2063
C-terminal 315 847 532 0,1189
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-115
Central
116-314
C-terminal
315-847

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenS-P840
[NCBI] 		3038268 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV23775.1 [NCBI]
Genbank nucleotide accession
OQ716682.1 [NCBI]
CDS location
range 15294 -> 17837
strand +
CDS
ATGGGTAAAGTTATTGTAGCCCTTGCTGGTGCGGCCATGATGGCTGTTGGTGCTGTGACTGGTAACTATTACCTGATTGCAGCAGGTATGGCCATGAATACGGCTAACCAATTGCTAGCTAAAAAACCAAAGATAGAAACGTATCGAGATCAGTCGGAGCGAAAGCAAATGCTTCGTTCTGCTGTAGCCCCTGAGAACGTGGTCATTGGTAAAACGGTTGTATCCGGATTATTGATGTTCGCAGAAGAAGAACCAGGGGAGCAGCAAGATGGAGAGTGGGTACATTTAGTCATAGTACTGGCCGGTCACCCTATTGAACGGATAGGTCGTATTTGGTTGGGTGATGATTTAATCAGTACCTTTGAAGACTATGCTACCTGGGAACTTCATAATGATCGGTCGACCTGTGACCCTTTCATGCTTGAAAAATGTCCGTCATGGAAAGAGGACATGATAGGTAAAGGGTTGGCATGGCTCAGAGTATCACTCAAGTTTAATGCCGAAAAATTCCCGTATGGCTTACCGAATATTAAAGCTGAGGTCTGGGGTAAAAAGTTGTATGACCCACGAACTGGTATGACTGAGTGGAGCAACAATCTGGCTCTGGGTGTATTAGATTATTATCGCTCAGTGCTGAAGGTTCCGGATACCGAGATTAATTGGGAACAATTTAAAGAAGCGGCAAATATTTGTGCTGAATTAATAGTCAACCCTGAAAACCAGTACGAAGCCCGTTATACAATGAATGGTAGTTTTGATTTGTCTGAAACCCCATCATCATTATTAGAGTCTATGCACTTATGCTGTGCGGGTGAACCGACTTATATTGCTGGTCAGCATGGAATACTGGTTGGCGCTTATTATGGCCCTCCACAATTAACGTTAAATGAACATCAAATGGCCGACTCCGTTCAAATAACAACGGAAACTTCGATGCGCGATGCGACTAATGCCATTTATGGGACTTTCGTTGACTGGGAACAGCAATCTACCAAGATTGACTTTACTCCTGTTCGCGTAAATGAATGGATTGTTGAAGATGGCTTAGAAATTAAAGAGGATGTTGATCTTCGCTTTATTGATACACCTTATCAATCCCAGAGAGTCGCCAATATTCTATTACGTCGTAAACGTGCCGGTCGGGTAGTTGTAGCAAAAACGAATTTGAGCGGATATGCCTATAGACCGGGCGCGGTAATTAAATTAGATATGCCGAGTATAGGGGTCAAAGAATCTGAGTTTAGAGTCACAGGTTGGCGGTTCAGCATGACGGGCGGTGCAGAATTAACTCTACAGGAAGAATCTGCTGAGTTTTATGATGATGCTATTGGTGAACCATTTACTCGACCTCCATTCACTCAGCTTCCTACGGGTGGTCCAGCTTCCCCTATTGGTTTGCAACTGCTGAATGAAACTGTGGGGGATATTGTGCAGGGCGTACTGGCGTGGACCAATATCGGAAGTATTTCCTATAACAACATCACCGTTTATCACTCTGACGGGACGGTGGTATTTACGGCACAGGTTCCGGGGAATAATTTACAACTGAGCGGATTACCGAGCGGTCCGTATATGGCGCAGGTTAGGGCGGTGAGTGTCATTGGTGTGCAATCATCCCCCGCCGGTATCTCGTTTGTTATCGAGCCACCCCCTGTACCGGTCGGCGTCGATGTAACAGCCGGGAACTGGTCGCTCATTCTTATCCCGCGCTTCAATGGGGTTACGACCATCGGCACATTGTGCGAGTTCTGGTACTACACCGAAGACATGCCGATTGATGAGGTGACGACGCGGGCGAAGTTTGTCGGTACCGGCGTCAGTATGTCTCATTCGGGACTGATGCAGAACACAACCTATTTCTATTGGGTGCGGGGGATCAACAACTACGGTAAATCGGCATTCTTCCGTGTTGAAGCCAAAACCACCTATGACCCCAGCTCTATTGTTGAGTTGCTGGACGGTGAAATTGGCGCGGAGCAGTTGCGGGAGGAACTGCGTAAACCGCTGGAAGAAACTATTGATATGTGGACAGCCAAAGTAGGTAATGACCACATCGCAGGCGGGATTGGCCTCACTATTGAAACAGACGATGACGGCAAAGAACGGATAAAATGCATTGTTGATGCAGATCTGTTTGCCATTGTTAACCGAAACAATAACACCAATATTAACCCGTTTGTGGTGAAAGACGGCACGGTATATATCAATCACCTGATGGTTGATAACGCCGAAATAGGGGAGATTATTGCAAAGTATATTAACGTTCAGCACCTAGTGGGTACTTTGATTGAAGGTTCCACGATTAAAGGTAGTCAGATTACGGGTACCAATATTTACGGCTCAACAATTACGGGTACCACGCTGAATGCCAATACCATAAATGGCGGCAGCATTAATATTGCCAATCTGTTCCGAGTGGATGCTAATGGAAACATTATCATGCAGGCCACGGCAGATACTGTCGGGATGAAAATAACCAACCAGACCATTTCTGTTTATCGCGGACCGGGTGACCGTGCAGTTGCTATGGGCTGGATAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cbe2a9635a6e0e1e00771428e66a524a20da3e74ac9a1b882dc8da986b7343cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8025
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia phage vB_YenS-840 Hammerl,J.A. 2003-08 — GenBank