Protein

Genbank accession
YP_009811107.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MANTIKTVMTYPLNGSTVDFNIPFEYLARKFVTITLIGNDRKVLTLNQDYRFSTKTTITLTKAWGPADGYDTIEVRRYTSATDRLVDFADGSILRAYDLNIAQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNVGDAVGDYDAINLHMMKTWNTSALNSANAAAASQAAAKTSENNSKTSENNAKTSENNSKTSENNAYQWAQRAEDSPVQGSEFSSYHYSRKSAKSAAAASVSEGNAATSERNAKTSENNAKTSETAAAASAQTAKDEAAKLENMNDLAAAIDHVDGVNVYWKGLLTAARVDAGELRATGGLFRLQNQGREMNFTLPASGAQVMVNRSSALNAINWGNMAQYSVGPIHVATSSSNIMGNQGAHLVWNESGDGRGSMVVNRGGGSGGFNFRFVNADNTQETGSVRMSGGGEMTTTGSIWTKDRVFVGGDGTNRAQLAADGNVWGTRWNSSGEWLYDWLIRNCMADMGRGGQQYRGGARVAWECSPGCFLTGTNTNVGDGRDMGSYFRQLVGRKINGGQFGIGDF
Physico‐chemical
properties
protein length:539 AA
molecular weight: 57869,99750 Da
isoelectric point:6,14847
aromaticity:0,07978
hydropathy:-0,50037

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604
YP_009811107.1
1 539
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoP_JA10
[NCBI] 		2283033 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009811107.1 [NCBI]
Genbank nucleotide accession
NC_048052.1 [NCBI]
CDS location
range 34181 -> 35800
strand +
CDS
ATGGCGAATACCATTAAGACCGTTATGACTTACCCGCTGAATGGCTCGACTGTGGATTTCAATATTCCCTTTGAGTATCTGGCCCGTAAGTTCGTGACGATTACCCTGATTGGTAATGACCGTAAGGTACTGACTCTCAATCAGGATTACCGATTCTCTACGAAGACCACCATTACCTTAACGAAGGCATGGGGTCCTGCTGATGGTTACGACACCATTGAGGTTCGTCGTTATACCTCTGCGACCGACCGTCTGGTTGACTTTGCGGACGGTTCGATTCTCCGTGCGTATGACCTCAACATCGCTCAGGTGCAGACACTCCACGTTGCTGAAGAAGCGCGAGACCTGACTGCTGACACTATCGGTGTGAACAACGATGGTAACCTTGATGCCCGTGGTCGTCGTATCGTGAACGTAGGTGATGCTGTAGGTGACTACGATGCTATCAACCTGCACATGATGAAGACATGGAACACCTCTGCGTTGAACTCTGCGAACGCTGCTGCTGCCTCTCAGGCCGCTGCCAAGACCTCGGAGAACAACTCGAAGACCTCTGAGAATAACGCTAAGACCTCAGAGAACAACTCGAAGACCTCTGAGAACAATGCGTACCAATGGGCGCAACGTGCAGAGGACTCTCCGGTGCAGGGTAGTGAGTTCTCCTCGTACCACTACTCACGCAAGTCCGCTAAGAGTGCTGCTGCTGCGAGTGTTTCTGAAGGCAACGCTGCGACTTCTGAGCGTAACGCCAAGACCTCTGAGAACAACGCTAAGACCTCAGAGACTGCCGCTGCTGCTTCTGCTCAGACCGCTAAGGATGAGGCTGCTAAGCTGGAGAACATGAACGACCTCGCGGCTGCTATCGACCATGTGGATGGCGTTAACGTCTACTGGAAGGGTCTGCTGACTGCGGCTCGTGTTGACGCTGGTGAGCTACGGGCGACTGGTGGTCTGTTCCGTCTACAGAACCAAGGCCGTGAGATGAACTTCACTCTACCCGCAAGTGGTGCTCAGGTGATGGTTAACCGCTCAAGCGCACTCAATGCGATTAATTGGGGCAACATGGCTCAGTATAGCGTGGGTCCTATTCATGTGGCCACATCATCGAGCAACATTATGGGTAATCAGGGTGCACACCTTGTGTGGAACGAATCGGGTGATGGCCGTGGCTCAATGGTGGTTAACCGTGGTGGTGGCTCTGGTGGTTTCAACTTCCGGTTCGTCAACGCAGATAACACACAGGAGACTGGTAGTGTCCGTATGTCTGGCGGTGGCGAGATGACCACGACTGGTAGCATCTGGACGAAAGACCGCGTGTTCGTTGGTGGTGATGGCACTAACCGTGCTCAGTTGGCCGCAGATGGTAACGTATGGGGTACTCGCTGGAATAGTAGTGGTGAGTGGCTCTATGACTGGCTCATCCGTAACTGTATGGCCGATATGGGGCGTGGTGGTCAACAGTATCGTGGTGGTGCTCGTGTTGCGTGGGAGTGCTCACCGGGTTGCTTCCTGACTGGTACTAACACCAACGTGGGCGATGGACGAGACATGGGCAGCTACTTCCGCCAGCTTGTCGGTCGTAAAATCAATGGTGGACAATTTGGTATTGGAGACTTCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
9a850fbf98c89141e086165161ba41e91a955f6ce90727d25ce47d09bf0c7a4a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6944
Evidence 0,6944
Download PDB

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank