Protein

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Genbank accession
YP_007518348.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAEQNNNGVPVGPPPLNVPIVDQMGMPTRAMSDFIHQLWQRSGGSEDNVDFILKLMTGGRQAVPKPVEQDEGASLAQMLAIVMSISPGVDPNQINKSFEARVPKGGIIMWSGASVPAGWALCDGQNDTPDLRDKFIRGAGGALNIGDTGGSNQETVNTSSVSTGITASSTASNTTNTAEAEPVGTPGTGINALTSVSTSVTTTINETSHNHSVTVNTVPEFYALAYIIKL
Physico‐chemical
properties
protein length:230 AA
molecular weight: 23952,48260 Da
isoelectric point:4,65121
aromaticity:0,04348
hydropathy:-0,18217

Domains

Domains [InterPro]
DC_2164
STR
19–230
DC_2164
IPR037053
ATT
93–132
IPR037053
SSF88874
STR
99–230
SSF88874
cd22641
STR
102–230
cd22641
IPR011083
ATT
105–126
IPR011083
YP_007518348.1
1 230
Architecture
STR
ATT
STR
STR 19-92 | ATT 93-132 | STR 133-230
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VvAW1
[NCBI] 		1168281 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio vulnificus
[NCBI] 		672 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007518348.1 [NCBI]
Genbank nucleotide accession
NC_020488 [NCBI]
CDS location
range 13350 -> 14042
strand -
CDS
ATGGCTGAGCAAAATAACAATGGCGTACCGGTAGGGCCACCACCGCTTAACGTGCCTATCGTTGATCAAATGGGGATGCCTACCAGGGCAATGTCAGACTTTATCCACCAGCTGTGGCAGCGCTCAGGCGGCAGTGAGGATAATGTTGATTTTATTCTCAAGCTTATGACTGGTGGCCGGCAGGCGGTCCCAAAGCCAGTGGAGCAGGACGAGGGTGCAAGCCTGGCGCAAATGCTGGCTATTGTGATGAGTATCAGTCCAGGCGTTGACCCTAATCAGATTAACAAGTCTTTTGAAGCCAGGGTTCCAAAGGGCGGCATAATCATGTGGTCTGGCGCAAGTGTTCCCGCTGGTTGGGCGCTATGTGATGGACAGAACGATACACCTGATCTTAGGGATAAGTTTATTCGTGGTGCCGGTGGCGCGCTTAACATTGGCGATACTGGCGGTTCAAACCAAGAAACAGTTAACACAAGCAGCGTCAGTACAGGCATAACCGCGAGCTCAACAGCAAGCAACACAACAAACACAGCAGAGGCTGAGCCGGTTGGCACGCCAGGAACAGGCATAAATGCACTGACAAGTGTGTCAACGTCTGTGACAACAACAATTAACGAGACAAGCCATAATCATTCTGTGACGGTCAACACTGTTCCAGAGTTCTATGCCTTGGCCTACATAATCAAGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad7a70b53ec6b933c884982ea18b7f5c1e6688e0496d2f3a599590b30b06748e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50