Protein

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Genbank accession
QXG83172.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MIPTYKNFRIGAVETGARGKPGKSAYELWLENGNKGTIEDFLNSLRGRDGKPGRPGAKGDKGDPGVQGIQGEPGVQGEHGVDSVYEINVEGKHGVMKYSNGVIECWGSGVIQEGTNQLDIALGFNYTGKDYSCVVIGEQPIPLYALVLDNHTIRIGVKDNVTNNLNVQYRCIGIKEV
Physico‐chemical
properties
protein length:177 AA
molecular weight: 19107,28720 Da
isoelectric point:5,93310
aromaticity:0,07345
hydropathy:-0,44633

Domains

Domains [InterPro]
DC_0108
STR
20–172
DC_0108
G3DSA:1.20.5.320
STR
44–102
G3DSA:1.20.5.320
IPR008160
STR
47–80
IPR008160
QXG83172.1
1 177
Architecture
STR
STR 20-172 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage cpx
[NCBI] 		2853265 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXG83172.1 [NCBI]
Genbank nucleotide accession
MW679027 [NCBI]
CDS location
range 8559 -> 9092
strand +
CDS
ATGATACCAACCTATAAAAATTTTAGAATAGGAGCCGTTGAAACTGGAGCCAGGGGAAAACCTGGAAAAAGTGCTTACGAATTATGGTTGGAAAATGGTAACAAAGGAACTATAGAAGACTTTTTAAATTCACTAAGAGGGCGAGACGGCAAACCTGGCAGACCTGGAGCAAAAGGAGATAAGGGAGACCCTGGGGTTCAAGGCATACAAGGGGAACCAGGTGTTCAAGGTGAACATGGTGTCGACAGTGTATATGAAATAAATGTTGAAGGTAAGCACGGTGTTATGAAGTATTCTAATGGGGTTATAGAATGTTGGGGGAGCGGTGTTATACAGGAAGGAACCAATCAATTAGACATAGCACTCGGTTTTAATTACACTGGTAAAGACTATAGTTGCGTTGTAATAGGCGAACAACCCATACCTTTATATGCACTGGTTTTAGACAATCACACAATAAGAATAGGTGTTAAAGACAATGTAACAAATAATTTAAATGTGCAATACAGATGTATAGGTATTAAGGAGGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d580c7c13e4a007c1cc0ca97cf99f461a362a405084d53af663f3efe803f58d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8622
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A bacteriophage of Clostridium perfringens Buttimer,C.T.H., Colom,J., Neve,H., Pang,R. and Hill,C. 2016-11-29 — GenBank