Protein

Genbank accession
YP_009811212.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,75
TF
Evidence Phold
Probability 1,00
Protein sequence
MPLVKVDVGMITATGASDNTPIRANAGVLTASADESGVPSEITDESSYDETSGILTLRFENGKSIQIKGFPTASSIPPGRQGARGETGADGKDGRDGRDGAQGGIGCTGPVGPDGDEGPPGKDGRDGNPGIPGEIGPTGATGPTGNVGPTGPMGRPGPTGATGKTGTTGPTGPEGPSGKLQIVVSSTQPGNMAAGVLWVNPSIDQAATWP
Physico‐chemical
properties
protein length:210 AA
molecular weight: 20512,23170 Da
isoelectric point:4,50048
aromaticity:0,02381
hydropathy:-0,51190

Domains

Domains [InterPro]
PTHR24637
58–179
PTHR24637
IPR008160
77–134
IPR008160
YP_009811212.1
1 210
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA29
[NCBI] 		2283031 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009811212.1 [NCBI]
Genbank nucleotide accession
NC_048053.1 [NCBI]
CDS location
range 64582 -> 65214
strand -
CDS
ATGCCTTTAGTAAAAGTTGATGTAGGCATGATCACAGCAACGGGGGCTTCCGACAATACGCCTATCCGCGCCAACGCTGGCGTGCTTACTGCATCGGCTGATGAATCTGGTGTGCCTTCGGAAATCACGGACGAATCAAGTTACGATGAAACTTCTGGAATTTTAACTCTGCGTTTTGAAAACGGAAAATCAATTCAAATAAAAGGTTTTCCAACGGCATCAAGTATTCCTCCGGGTAGACAAGGTGCGCGTGGTGAAACTGGCGCAGATGGAAAAGACGGAAGAGACGGACGCGACGGGGCGCAAGGTGGAATTGGTTGTACCGGACCAGTCGGGCCAGACGGCGATGAAGGGCCACCGGGAAAAGATGGTCGCGATGGTAATCCGGGAATTCCGGGAGAAATCGGTCCAACTGGTGCAACCGGCCCAACTGGAAATGTCGGACCAACTGGGCCGATGGGTCGCCCCGGTCCAACTGGTGCAACTGGAAAAACCGGAACAACTGGACCAACTGGACCAGAAGGCCCAAGTGGAAAATTGCAAATCGTTGTAAGTTCTACTCAACCGGGAAATATGGCGGCTGGTGTGTTGTGGGTGAATCCTTCTATTGATCAAGCTGCAACGTGGCCGTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
9a0a8cafa4dbc169e3875c849c11e567a35953e548f8017f07b3a42b616ee4c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7088
Evidence 0,7088
Download PDB

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank