Protein

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Genbank accession
ADO99741.1 [GenBank]
Protein name
sericin 1 precursor-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MSQLNVDRLISLGGGGGTASIQLESSGNFNFDTGTLYVDSINNEVGIGTTTPRASLDIATTDGIIVPVGTTAQRPGSPVEGLFRYNSTDRTFEGYSFNEGTNAVEWGPIAGAGGGTPNQSTDRYSFDYSKGAVLKSDGTNAYWEIAGQATEWSMARIWTHGYVGGGYQSGSPWNNVNRTVHSTDTSTNLGNTLDRSGAYMAGSFSDNRHWFHSMENTYRGSSNYTSGFSMTSETGITHQSQWDMTVSRGSMGSFQDYEFQGGYSYLIGGGNARTDAFNLKTEVMRTSGFPPNHSDGGDDPTWGGNARLKGWYKRSGTRQALIWNTESWQNWTQGPGGDGWKKILGTMLGHMYVGTGNNNQNGNQRVDDSSGVQTGGLNFGNMGEENFQIGMRKGYCLGNYNGAQNNNTFKVNYATDGYNNLGGSSPPSGHGGMSSAHCSSASAISGVDDAGAVQYDYGTNIPNY
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49652,97850 Da
isoelectric point:5,16674
aromaticity:0,11207
hydropathy:-0,68254

Domains

Domains [InterPro]
DC_0841
STR
1–277
DC_0841
IPR059888
RBD
46–111
IPR059888
ADO99741.1
1 464
Architecture
STR
STR 1-277 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn33
[NCBI] 		444878 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99741.1 [NCBI]
Genbank nucleotide accession
GU071108 [NCBI]
CDS location
range 29579 -> 30973
strand +
CDS
ATGTCTCAATTAAATGTTGACAGATTAATATCCTTAGGTGGAGGTGGTGGTACTGCCTCCATTCAATTAGAGTCTAGTGGTAACTTTAATTTTGATACTGGCACTCTGTATGTTGATAGTATCAATAATGAGGTGGGGATTGGTACTACTACGCCAAGAGCATCTTTAGATATTGCTACTACTGATGGTATCATTGTACCTGTAGGAACAACTGCACAAAGACCAGGATCGCCCGTTGAAGGTTTATTTAGATATAACTCAACAGACCGAACATTTGAAGGTTATTCTTTTAATGAAGGTACTAATGCTGTAGAATGGGGACCAATTGCTGGTGCTGGTGGTGGAACACCTAATCAATCTACAGACAGATATAGTTTTGACTATTCTAAGGGTGCTGTATTAAAATCTGACGGAACTAATGCTTATTGGGAAATTGCTGGTCAGGCAACTGAATGGAGCATGGCAAGAATTTGGACGCATGGATATGTTGGTGGAGGTTATCAAAGTGGTAGTCCCTGGAATAATGTAAACCGTACTGTTCACTCTACAGATACATCAACAAACCTTGGCAATACTTTAGATAGATCTGGTGCTTACATGGCAGGGTCTTTCTCAGATAATCGTCACTGGTTCCACTCAATGGAGAACACGTACAGAGGTTCTTCTAACTATACATCTGGATTCAGTATGACATCTGAGACAGGTATTACTCACCAGTCACAATGGGATATGACTGTAAGTAGAGGTTCGATGGGTTCATTCCAAGATTATGAATTCCAAGGAGGTTATTCATATTTAATTGGTGGTGGTAATGCTAGAACTGATGCATTTAATCTCAAAACTGAGGTTATGAGAACATCTGGATTTCCACCTAATCATAGTGATGGAGGTGATGATCCTACATGGGGTGGTAATGCAAGATTGAAGGGTTGGTATAAGAGATCTGGTACTCGTCAAGCATTAATTTGGAATACTGAATCTTGGCAGAACTGGACACAAGGACCAGGTGGTGATGGATGGAAGAAGATTTTAGGCACCATGTTAGGTCACATGTATGTGGGAACTGGTAATAATAATCAGAATGGTAATCAGAGAGTTGATGATTCGAGTGGTGTTCAGACAGGAGGTCTGAACTTTGGTAATATGGGAGAGGAAAACTTCCAGATTGGTATGAGAAAAGGTTATTGTTTGGGTAACTACAATGGTGCTCAGAATAATAATACCTTCAAGGTGAACTATGCTACTGATGGTTATAATAACCTCGGGGGTTCTTCACCTCCATCGGGTCATGGTGGCATGAGTTCTGCTCACTGTTCATCTGCATCTGCTATTTCGGGTGTTGATGACGCTGGAGCAGTTCAGTACGATTACGGCACAAATATTCCTAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
99138909d4235ab14314cdf22c6576484f82d0f5225387f954585c91b2c86435
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3734
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn33 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank