Protein

View in Explore
Genbank accession
AXC42268.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGGGKASTPKLLDDNLKSKQFYRVLDLISEGPIAGPVDQEHMSSFMLNKTPITDASGNVNVNGISVAWRPGSETQQPINGFSAIEATTIVNTDVTHDTPLVRTITDQDVTRVRFNVGVTGLVEQDTKGNQNNTSVTMVLESRTGASGWVIEKTVTITGKISGQYLEAHLIDAPDIKPFDIRVRRITPDSSSDLLSNGTIWNSYSEITDDNLSYPFSAIAGAVIDRDQYTDTPSRTYHLRGLIVDVPDNYDPIARTYSGLWTGGFKKAWTNNPAWLFRELAKNTRFGLAKRAGYIDVDDGALYVLSQYCDQLVNDGYGGQEPRMTLNAYITEQASARDILDKIASMFRGIALWDGMRLSVMLDAPQDPIATITNSNVVDGEFKRSSVKRSEKYNAVVVSWTDPDNGWEQVKEYVSDDEMIARGNYNETTLEAFGCTSRGQAWRAGKWLLETAKRESSRLSFQMARDAIHFTPGDIVEIMDNNYAGARLGGRIMSHSGNKITVDAVESSLIAGGDTMSIMGSSGKFVKYVIDGVANNVVTLKTTPSWVRDGTVFAISTSNVSTRLFRILSVAETENNSVYSITASQHDPNKQAIVDEGAVFEIPNDTLNGYRVPNVENLRIINTNSETVQVMATWETATTTKKLVFELYVYSGDGKVVSQYETDQFRYEFYGLAAGSYTLGVRGRNENGMKGVETQISMIIGAPPAPSSIIWTPGLFSADLVPVMRITATTDTSFEFWYSGQNKITDPANIEDLAQFLGRSNQWTLHGLQADKTYYVYVRTRNAFGVSEFVEASGQASSDIPGMIDLIDEQIRESDAFKNVQEGVDINLEGVMSNALANHGKVEHQYQQYGEVRADILVVKTTVATAEQGLADLSTYVQAQIGPEGELTSAVNQKMTAEVNSDGTAKASYTLNMGIVRNGVKYNTGFGMSIEPSGNSYKSTVVFAAEQFGIYSGNNPGNWQAAFFVYNGQVFIRSALIQEASIDFAKITDSLQSANFIPGGGGRGWNLPKSGSPEFHGKLYADSGEFAFNGVNNVTRIDGNGITVNLSGGGRVVVGRWT
Physico‐chemical
properties
protein length:1059 AA
molecular weight: 115696,66990 Da
isoelectric point:4,96394
aromaticity:0,09160
hydropathy:-0,29292

Domains

Domains [InterPro]
IPR053171
Unmapped
1–880
IPR053171 IPR015406
DC_0014
STR
1–1059
DC_0014
IPR055385
ATT
87–211
IPR055385 IPR032876 IPR055383 IPR057587
IPR003961
STR
613–691
IPR003961 IPR003961
IPR036116
STR
617–792
IPR036116
IPR003961
STR
726–794
IPR003961
AXC42268.1
1 1059
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-86 | ATT 87-211 | STR 212-331 | ATT 332-494 | STR 495-705 | ATT 706-809 | STR 810-1059
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC42268.1
1 1059
Domain Start End Length (AA) Confidence
N-terminal 1 492 492 0,7941
Central domain 493 987 496 0,1097
C-terminal 988 1059 71 0,6100
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-492
Central
493-987
C-terminal
988-1059

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S137
[NCBI] 		2231359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC42268.1 [NCBI]
Genbank nucleotide accession
MH370383.1 [NCBI]
CDS location
range 21587 -> 24766
strand +
CDS
ATGTCTTCAGGTGGTGGTAAAGCATCAACCCCAAAACTCCTCGACGATAACCTCAAATCAAAACAGTTTTACCGGGTTCTCGATCTGATATCGGAAGGTCCGATTGCAGGGCCTGTCGATCAGGAACACATGTCATCGTTTATGCTTAACAAGACACCAATCACGGATGCAAGCGGAAACGTTAATGTGAATGGAATTAGCGTAGCGTGGCGCCCCGGATCGGAAACTCAGCAGCCAATTAATGGCTTTTCTGCTATTGAAGCAACCACCATCGTAAACACAGATGTAACCCATGACACCCCTCTTGTTCGTACCATAACCGACCAGGACGTAACCCGGGTGCGGTTCAACGTAGGCGTTACCGGTCTGGTTGAGCAGGACACTAAAGGAAACCAGAACAACACTTCCGTCACCATGGTGCTTGAGAGTAGAACAGGTGCTTCAGGATGGGTCATTGAAAAGACAGTTACTATCACCGGTAAAATATCAGGCCAATATCTCGAGGCTCATCTGATCGACGCTCCAGATATTAAGCCGTTTGATATTCGTGTACGCCGCATTACGCCTGACAGCAGCAGCGATTTACTGTCCAACGGCACTATCTGGAATAGCTACAGTGAAATCACCGACGACAATCTGAGCTACCCATTTTCAGCCATCGCTGGCGCTGTTATCGACCGCGACCAGTACACTGACACTCCAAGCCGCACCTACCATCTTCGCGGACTGATTGTGGACGTTCCTGACAACTATGATCCGATTGCCAGAACTTACTCGGGGTTGTGGACTGGCGGATTCAAAAAAGCGTGGACTAACAACCCGGCGTGGCTGTTCCGTGAACTGGCCAAGAATACGCGTTTTGGCCTGGCGAAACGTGCCGGTTATATCGATGTAGATGACGGTGCGTTGTACGTCCTCTCACAATATTGCGATCAGCTTGTGAACGATGGCTATGGCGGGCAGGAACCAAGGATGACGCTGAATGCCTATATTACCGAGCAGGCGAGTGCGCGTGACATTCTCGACAAGATAGCGAGCATGTTTCGGGGTATAGCGCTGTGGGACGGGATGCGACTGTCTGTCATGCTGGACGCGCCACAGGATCCGATAGCGACAATCACGAATTCTAACGTGGTTGATGGCGAGTTCAAGCGTAGCTCCGTGAAGCGTTCAGAGAAATACAATGCCGTTGTTGTGTCCTGGACTGACCCTGATAACGGCTGGGAGCAGGTAAAAGAGTATGTTTCCGACGATGAGATGATTGCCCGCGGAAACTACAACGAAACCACTCTTGAGGCGTTTGGCTGTACCTCACGCGGTCAGGCATGGCGAGCAGGGAAATGGCTGCTGGAAACAGCAAAGCGTGAAAGCAGCAGACTGTCTTTCCAGATGGCGCGCGATGCTATCCACTTCACACCGGGTGACATAGTTGAAATCATGGACAACAACTATGCTGGCGCGCGGCTCGGCGGCAGAATTATGTCACATTCAGGCAATAAAATTACCGTTGATGCTGTCGAATCATCGCTTATAGCTGGCGGCGATACCATGTCTATCATGGGGAGCAGCGGTAAGTTCGTGAAGTACGTCATTGATGGCGTTGCTAACAACGTTGTAACCCTGAAGACGACTCCATCATGGGTGCGGGATGGAACAGTGTTTGCTATCTCTACCAGCAACGTTTCAACTCGGTTATTTCGTATCCTCAGCGTCGCAGAGACAGAAAACAATTCCGTATACAGTATTACTGCATCACAGCATGATCCGAATAAACAGGCCATTGTGGATGAAGGCGCAGTGTTCGAAATTCCTAACGACACGCTTAATGGCTACCGCGTTCCGAACGTTGAAAACCTGCGGATTATTAACACCAATTCGGAAACGGTACAGGTTATGGCGACATGGGAAACAGCTACGACGACCAAAAAGCTTGTTTTCGAACTTTATGTCTACTCGGGTGATGGGAAAGTGGTTTCTCAGTACGAAACAGACCAGTTCCGGTATGAGTTTTATGGGCTGGCCGCCGGTAGCTACACGCTGGGTGTTCGTGGCCGCAATGAAAACGGGATGAAAGGTGTTGAAACGCAGATCAGTATGATTATCGGTGCGCCACCTGCACCATCCAGCATTATCTGGACGCCCGGCCTGTTTTCTGCTGACCTGGTGCCAGTCATGCGTATCACCGCCACCACAGATACTTCTTTCGAATTCTGGTACTCAGGGCAAAACAAGATTACCGATCCGGCTAATATCGAAGACCTGGCGCAGTTTTTGGGGCGCTCAAACCAGTGGACACTCCACGGCCTGCAGGCAGATAAGACATATTACGTTTATGTGCGCACCAGGAATGCTTTTGGTGTGTCTGAGTTTGTTGAGGCGTCAGGTCAGGCGTCATCCGATATTCCAGGTATGATAGATCTCATTGATGAGCAGATACGCGAGTCAGACGCGTTCAAAAATGTTCAGGAAGGTGTCGACATTAACCTGGAAGGCGTCATGTCGAACGCACTGGCTAATCACGGTAAGGTTGAACATCAGTACCAGCAGTATGGGGAGGTTCGCGCCGACATCCTTGTTGTGAAAACAACTGTCGCTACTGCCGAGCAGGGGCTCGCCGATCTTTCCACTTACGTACAGGCACAAATAGGCCCTGAAGGAGAGTTAACCTCAGCCGTAAATCAGAAAATGACCGCTGAGGTAAATAGTGATGGGACTGCAAAAGCCTCTTACACACTCAATATGGGGATTGTCAGGAACGGTGTGAAATATAACACCGGATTCGGCATGTCTATCGAGCCATCGGGGAATAGCTATAAATCTACCGTTGTATTTGCTGCGGAACAGTTCGGCATTTATTCCGGTAATAACCCCGGCAACTGGCAGGCTGCATTCTTCGTCTATAACGGACAGGTATTTATTCGTAGCGCATTAATTCAGGAAGCATCCATCGATTTTGCGAAAATTACCGATTCACTTCAGTCTGCAAACTTTATCCCCGGTGGTGGTGGACGCGGATGGAATTTACCAAAATCTGGTAGCCCAGAATTCCATGGGAAACTCTATGCCGACAGCGGTGAATTTGCATTTAACGGAGTGAATAACGTTACTCGCATTGACGGCAATGGGATCACAGTAAATCTCTCAGGAGGTGGTCGTGTTGTTGTTGGACGATGGACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
271a01a4eb7bba8d90da4205ac770e619d49a6cd5eac27685dbc0d33df8f4b0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50