Protein

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Genbank accession

WPK17878.1 [GenBank]

Protein name

short tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,88

Protein sequence

MSNNTYQHVSNESRYVKFDPTGTNFPAEITDVQAAIAAISPAGVNGVPDASSTTKGILFLATEQEVIDGTDNTKAVTPATLATRLSYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESKNGVIKISSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSESTATESAQGVVQLATVAQVRQGTLREGYAISPYTFMNSTATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEQDDAGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE

Physico‐chemical properties

protein length:	527 AA
molecular weight:	55832,20380 Da
isoelectric point:	7,02578
aromaticity:	0,06641
hydropathy:	-0,39241

Domains

Domains [InterPro]

DC_0176
STR
1–450

DC_0176

IPR015173
STR
246–326

IPR015173 IPR037053 IPR044916

SSF69349
STR
246–326

SSF69349 SSF88874

G3DSA:2.10.280.10
Unmapped
246–286

G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR011083 IPR027448

WPK17878.1

1 527

Architecture

STR

ATT

STR

STR 1-329 | ATT 330-400 | STR 401-525 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0176	STR	DC_0176	1	450	Novel HMM	DC_0176	Central	Low	Positional only	613 proteins / 613 hits
IPR015173	STR	DC_0719	246	326	InterPro cluster	Bacteriophage T4, Gp12	Central	Low	Positional only	349 proteins / 349 hits
SSF69349	STR	SSF69349	246	326	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
G3DSA:2.10.280.10	Unmapped	-	246	286	Gene3D	None	-	-	-	-
G3DSA:2.160.30.10	RBD	G3DSA:2.160.30.10	287	329	Merged direct domain	G3DSA:2.160.30.10	C-terminal	Low	Positional only	1 proteins / 1 hits
IPR037053	ATT	IPR037053	330	396	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	333	525	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	344	400	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	397	518	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	433	525	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage BYEP01 [NCBI]	3093891	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WPK17878.1 [NCBI]

Genbank nucleotide accession

OR757453.1 [NCBI]

CDS location

range 158176 -> 159759
strand -

CDS

ATGAGTAATAATACATACCAACACGTTTCTAATGAATCTCGCTATGTAAAATTTGATCCAACTGGCACAAATTTTCCAGCAGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGTGTAAATGGAGTTCCTGATGCATCATCAACAACAAAAGGAATTTTATTTCTTGCCACTGAACAGGAAGTTATCGATGGAACTGATAATACCAAAGCAGTTACACCAGCAACGTTGGCAACAAGATTATCTTATCCAAACGCAACTGAAACTGTTTACGGATTAACAAGATATTCAACCAATGATGAAGCAATTGCTGGAGTTAATAATGAATCTTCTATAACTCCTGCTAAATTTACTGTTGCCCTTAATAATGCCTTTGAAACACGAGTTTCAACTGAATCAAAGAATGGAGTTATTAAAATTTCATCTCTACCGCAAGCATTAGCTGGCGCAGATGATACTACTGCAATGACTCCATTAAAAACGCAGCAGTTAGCTATTAAACTAATTGCGCAAATCGCTCCTTCTGAATCCACAGCTACCGAATCGGCCCAAGGTGTTGTTCAATTAGCGACAGTAGCTCAAGTTCGTCAAGGAACTTTAAGAGAAGGCTATGCAATTTCTCCTTATACGTTCATGAATTCTACTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACGCAATCAGAAGTTAACTCAAATAATGCTTCTGTTGCGGTTACTGGCGCAACTCTTAATGGTCGTGGTTCTACAACGTCAATGAGAGGCGTAGTTAAATTAACTACAACCGCCGGCTCACAGAGTGGAGGTGATGCTTCATCAGCACTAGCTTGGAATGCTGACGTTATCCATCAAAGAGGTGGTCAAACGATTAATGGAACACTTCGCATTAATAATACGCTCACAATAGCTTCAGGCGGAGCAAATATTACCGGAACAGTTAACATGACCGGTGGTTATATTCAGGGTAAGCGTGTCGTAACGCAGAATGAAATAGATAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCGGCTGATAGCCTTCCTAGTGATGCTTGGCGCTTCTGCCATGGCGGAACTGTTTCAGCATCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATACGGCGGAAGCTCATCAAATCCTGGATTACCTGATATGCGTGGTCTTTTTGTTCGTGGCTCCGGTCGTGGCTCTCACTTAACAAATCCAAATGTTAACGGTAATGACCAATTTGGTAAGCCTAGATTAGGTGTAGGCTGTACCGGTGGATATGTTGGTGAAGTACAAAAACAGCAGATGTCTTATCATAAACACGCTGGCGGATTTGGTGAGCAGGATGATGCCGGGGCATTCGGTAATACTCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAATGACGGATATGAAATTGACCCAGAATCACAACGAAATTCCAAATACACATTAAATCGTCCTGAATTAATTGGAAATGAAACACGCCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Genome Context

Tertiary structure

PDB ID

0e20c10d1fb67de0c78d109c8283eb69e023150ca4a28cd5e720924f422ed232

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6872

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence