Protein

UniProt accession
C1KFM1 [UniProt]
Protein name
Neck protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MDDQDMQNGYPYGENNPKRVDLDKIDSFTPDLYGLTPSAIKGYMVGMDIKDPETGESLPDSWYWDIIESAIKKAEDVLDIVILPRAIAREHHDYYDSEYNSYAFTTLYKKPIIQVLKFKLQMNNFNVFNYPPEWWKIYPLAGQIQIFPSPLMQATGMGGSGSSMSLGFMSAPVVVANSFAFNGASGNYAPQAFDIDYVAGFLPPKRYAVTQDFEFPAELRQLVIKYAMKEALQQWGRLIIGAGIAGRSFSIDGISESIETTQSAMYTGSRADIDIIDQDISDLLDALRAKFQPQFTEL
Physico‐chemical
properties
protein length:298 AA
molecular weight: 33469,49350 Da
isoelectric point:4,50917
aromaticity:0,12752
hydropathy:-0,23221

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Lb338-1
[NCBI] 		2892342 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c6de1607d0efb35072326eb124f50eb9184e8f8c5d77bc29cfd7ae77f1ccdcc4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7366
Evidence 0,7366
Download PDB

Literature

Title Authors Date PMID Source
Genome of a virulent bacteriophage Lb338-1 that lyses the probiotic Lactobacillus paracasei cheese strain. Alemayehu D, Ross RP, O'Sullivan O, Coffey A, Stanton C, Fitzgerald GF, McAuliffe O 2009-12-01 19712732 PubMed
Genome of a virulent bacteriophage Lb338-1 that lyses the probiotic Lactobacillus paracasei cheese strain Debebe Alemayehu, R. Paul Ross, Orla O'Sullivan, Aidan Coffey, Catherine Stanton, Gerald F. Fitzgerald, Olivia McAuliffe 2009-12 10.1016/j.gene.2009.08.008 DOI