Protein

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Genbank accession
WBM58844.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MAELRSTTAIGGNIVWHGGNLRFDPQGETIRYQGYKIYTEHDTPLPGELGNGGTTSAFTKAESDARFAPIAGGGYVQKIGDTMTGKLTNTANEIEIRGGSPRLLLQDNDGTKRWYLINDGGNFSLRENDTATTRFRIDAAAANFGIENIDINSKTAFRGFDSWLRINDQAAFTTGVYFGSSLVRTDGTLQVGSATASGFVVNTTAIKYKDNNVFHDGYHPNADKWTTARTLTTTLTGDVSGSASMTIDGSANATVTVTATVANDSHTHDGRYYTETESDARFANVAGDTFTGNVAISKAGGRLSFNETNYQTDNSGINWITSASQNLELIHEITDGDINTSGGNGQALIIRQNGGVGSPAGLEVEGEIFAKVNQRVFHDAYHPNADKWTTARTLTLNGDVSGSVSIDGSANATMTVTVANDSHTHDGRYYTEAESDARFANVSGDTFTGRILTPYLSNISTSNLDTAGDGSGYSFMYATSTATNKPSGQDHAVLTQSYSDLWQTQLASDWRLNKWFVRTQENGTWKSWAQIFTDIYHPNADTWTTARTLTVGNTGKSVNGSANVAWSLSEIGAVSKSGDTINGQLTIRHTNVQLNLMDSTYSDNYWQLDHQNGVMAFRYNGSASDDFRLNENGTAVFAHSVTAPTFVGSLSGNATSATTATYLGSSLISSNGGQDFKIRNKRALVGTTSNLIVNYGNDFTDVTVQSALLSTGRMTAYGSAASYAYASHYTSQAPFYHYKSSSGTSEYHAFMKGDINHSGGRYQHSFGAILSSSGAHTAQIVSSLNSSTTKQWSFQYSTGNFTAPGNVTAYSDRRLKKNIKLIDNALNKVGELNGYTYDKRSSFDSDEYIRETGVIAQEVEKVLPEAVMESDDEERILSVAYGNMNGLLIEAIKELNAKVDTLQNEVHELKRPWWKKLLRL
Physico‐chemical
properties
protein length:920 AA
molecular weight: 99705,83890 Da
isoelectric point:5,55842
aromaticity:0,09674
hydropathy:-0,46772

Domains

Domains [InterPro]
DC_0056
ATT
1–358
DC_0056 IPR005601 cd19958 IPR030392 Coil
DC_0000
STR
375–919
DC_0000
IPR030392
CHP
811–906
IPR030392
WBM58844.1
1 920
Architecture
ATT
STR
ATT 1-358 | STR 372-919 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBM58844.1
1 920
Domain Start End Length (AA) Confidence
N-terminal 1 869 869 0,0972
Central domain 870 909 41 0,3286
C-terminal 910 920 10 0,3743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-869
Central
870-909
C-terminal
910-920

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValM_PVA8
[NCBI] 		3019005 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBM58844.1 [NCBI]
Genbank nucleotide accession
OQ164647 [NCBI]
CDS location
range 59654 -> 62416
strand -
CDS
ATGGCAGAACTAAGATCAACTACCGCGATTGGTGGTAATATAGTCTGGCACGGAGGAAATCTTCGCTTTGACCCGCAAGGCGAGACTATCCGCTACCAAGGCTACAAAATTTACACAGAACACGACACACCACTGCCAGGCGAACTAGGTAACGGTGGGACGACTTCTGCATTTACAAAAGCTGAATCTGATGCTCGATTTGCCCCGATTGCGGGCGGTGGCTACGTTCAAAAGATCGGCGATACGATGACGGGTAAACTGACAAATACGGCGAATGAAATTGAGATTCGAGGTGGTTCTCCGCGTCTGTTGCTTCAAGATAATGACGGTACAAAGCGTTGGTATCTGATCAACGATGGTGGTAATTTTAGTTTACGTGAAAATGATACTGCGACAACTCGCTTCCGTATTGATGCAGCGGCAGCAAACTTCGGCATTGAGAACATTGACATCAACTCGAAAACAGCATTTCGCGGATTCGATTCGTGGTTGAGAATCAATGACCAAGCCGCATTTACAACTGGGGTATACTTCGGCTCGTCTCTAGTTCGTACTGATGGTACGTTGCAAGTCGGTTCAGCGACTGCAAGTGGGTTTGTTGTTAATACAACTGCGATCAAGTACAAAGATAACAATGTGTTTCACGACGGTTATCATCCAAATGCTGATAAGTGGACAACTGCACGCACGCTCACAACGACTCTAACGGGCGATGTAAGCGGTTCTGCGTCTATGACGATTGATGGGTCGGCTAACGCAACTGTGACCGTTACAGCGACTGTAGCGAACGATTCACACACGCATGATGGTCGTTACTACACTGAAACAGAATCTGATGCTCGTTTTGCTAACGTGGCTGGCGATACGTTCACTGGTAACGTTGCAATTAGCAAAGCTGGCGGTCGTTTGAGTTTTAACGAGACAAACTATCAAACAGATAACTCGGGTATCAACTGGATTACCAGTGCAAGCCAGAACCTTGAATTGATTCACGAGATCACTGATGGTGATATTAACACGTCAGGTGGAAATGGTCAAGCGTTGATCATTCGTCAGAATGGCGGTGTTGGTTCACCTGCTGGTCTTGAAGTTGAAGGTGAGATTTTTGCTAAAGTAAACCAACGAGTGTTTCATGATGCATATCACCCGAACGCGGACAAATGGACAACTGCTCGTACGTTGACATTAAACGGCGATGTAAGCGGCTCGGTTTCTATTGATGGTAGTGCAAATGCGACAATGACAGTTACGGTTGCTAATGACTCACATACGCACGATGGTCGATACTACACTGAAGCTGAATCTGACGCTCGGTTTGCAAATGTATCAGGTGATACATTCACTGGAAGAATCTTAACACCATATTTGTCTAACATTAGCACGAGTAACCTCGATACAGCGGGTGATGGTAGTGGATATTCATTCATGTATGCTACGTCAACTGCGACTAATAAACCATCGGGGCAAGATCATGCAGTATTGACACAATCATATAGTGATTTGTGGCAAACTCAACTGGCAAGTGACTGGCGTTTGAATAAATGGTTTGTTCGCACGCAAGAAAATGGTACATGGAAATCATGGGCTCAGATATTCACTGACATTTATCACCCGAATGCCGACACGTGGACAACTGCTCGTACGTTGACAGTCGGAAACACTGGTAAATCTGTAAACGGATCTGCTAACGTTGCGTGGTCATTGTCCGAAATTGGTGCAGTTAGCAAGTCAGGTGATACGATCAATGGACAGTTGACGATTCGACACACAAACGTTCAGTTGAACTTGATGGACAGTACGTACAGCGATAACTACTGGCAGCTTGACCATCAAAACGGCGTCATGGCGTTTAGATACAACGGTAGTGCATCTGATGATTTCAGATTGAACGAAAACGGAACTGCGGTGTTTGCGCATAGTGTAACAGCGCCGACATTCGTGGGTTCTCTGAGTGGCAACGCGACATCGGCTACCACAGCAACCTATCTCGGGTCTTCTTTGATTAGCTCAAATGGCGGTCAAGATTTCAAGATTCGTAATAAGCGAGCATTAGTAGGTACAACGTCAAACTTGATTGTCAACTATGGGAATGACTTTACTGATGTAACAGTTCAAAGTGCATTGTTGTCTACGGGTAGGATGACGGCTTACGGATCTGCGGCGTCTTATGCATATGCTTCGCATTACACGTCACAAGCCCCATTTTATCACTACAAATCAAGTTCGGGTACTAGTGAATATCATGCTTTTATGAAAGGTGATATTAACCACTCGGGTGGTCGTTATCAGCACTCATTCGGTGCTATTTTGAGTTCTTCTGGCGCGCATACGGCTCAGATCGTTTCGTCGCTGAATAGCTCAACGACTAAGCAATGGTCATTCCAGTATTCAACTGGTAACTTCACTGCGCCGGGTAACGTGACAGCGTACTCAGACCGACGTTTGAAGAAAAACATCAAGCTTATTGACAATGCACTCAATAAAGTAGGTGAATTAAACGGGTATACATATGACAAGCGTAGTTCATTCGATTCTGACGAATATATTCGTGAGACGGGTGTGATTGCGCAAGAAGTGGAAAAAGTACTGCCAGAAGCAGTGATGGAAAGTGACGACGAAGAACGTATTCTATCAGTCGCGTACGGCAATATGAACGGTCTTTTGATTGAAGCTATTAAAGAGCTTAATGCAAAAGTAGACACGCTTCAGAACGAAGTACACGAGCTTAAACGCCCATGGTGGAAGAAGTTGCTTCGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9d6a7212b2aaafce59b3f1040a804bcb984d480a788c38010c060e5fe149edf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5674
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50