Protein

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Genbank accession
ANN87551.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MEKFMAKFGQGYVQTPFLSESNSVRFKLSIAGSCPLSTSPTYIKFQDNPLGSQVFSVGLNVRVINPTTGAVVESKSYNFSTENDATSSAFVTFMDTYASNFIFALVTNAKTNFPPEVLAWFTKAGSSAIPLAQQVLNIVDISYSAFYISGKNAIALEHIKYSNKKTSTDYSTPLDVVYDTIDDIGATGFPRRTYESTDTFLSAVGGTNNEIKRMPTTSIITPLAGYKLKPGDFLYMKFQLMADADLLAQGTTRLSIRFFKSPSTSPISFKDINFDGSAGEWKIYEDYIEIPAGADGFTIYCYRTAPVGQGGLRNVIFTEVSCNGSVSKPAEFGINGIRVNYVSESLSAPDIMTLPTQSSTDTGKVFGQEFKEA
Physico‐chemical
properties
protein length:373 AA
molecular weight: 40691,41530 Da
isoelectric point:5,27275
aromaticity:0,12332
hydropathy:-0,09678

Domains

Domains [InterPro]
DC_0912
STR
1–373
DC_0912
PS52031
LEC
22–193
PS52031
IPR039477
STR
58–129
IPR039477
ANN87551.1
1 373
Architecture
STR
STR 1-373
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANN87551.1
1 373
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,2117
Central domain 173 362 191 0,4837
C-terminal 363 373 10 0,4915
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-362
C-terminal
363-373

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SHSML-52-1
[NCBI] 		1863011 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANN87551.1 [NCBI]
Genbank nucleotide accession
KX130865 [NCBI]
CDS location
range 49323 -> 50444
strand -
CDS
ATGGAAAAATTTATGGCTAAGTTTGGACAAGGATACGTCCAAACGCCATTTTTATCGGAAAGCAATTCAGTACGATTTAAATTAAGCATAGCGGGCTCTTGTCCGCTATCAACATCTCCTACTTATATTAAGTTCCAAGATAATCCACTTGGGTCCCAGGTTTTTTCCGTTGGATTAAACGTTCGTGTAATAAATCCTACAACAGGTGCAGTAGTTGAATCTAAGTCATATAATTTCTCTACTGAAAACGACGCAACGTCAAGTGCATTTGTTACTTTCATGGACACATATGCTTCAAATTTTATATTTGCTCTTGTTACTAACGCTAAAACAAACTTTCCACCAGAAGTTCTTGCATGGTTTACCAAAGCTGGGAGTTCTGCTATTCCATTAGCTCAACAAGTTTTAAATATAGTGGACATTTCTTATTCTGCATTTTATATTTCTGGTAAGAATGCTATAGCATTAGAACATATTAAGTATAGTAATAAGAAAACTTCAACTGACTATAGTACACCACTTGATGTTGTGTACGACACGATCGATGATATTGGTGCTACCGGCTTCCCTAGACGTACGTACGAATCGACAGACACATTTTTATCTGCCGTTGGAGGTACTAATAACGAAATTAAAAGGATGCCTACAACATCCATTATTACGCCTCTCGCTGGGTATAAATTGAAGCCTGGAGATTTCCTTTATATGAAATTCCAACTAATGGCCGATGCTGATTTGTTAGCACAAGGGACGACACGACTTTCTATTCGTTTCTTTAAATCTCCTTCTACTTCACCTATTTCATTTAAAGATATAAACTTTGATGGGAGCGCAGGTGAATGGAAGATATATGAAGACTACATAGAAATTCCTGCTGGTGCTGACGGGTTCACGATTTATTGTTATCGTACAGCTCCAGTCGGCCAAGGTGGATTAAGAAACGTTATATTCACTGAAGTATCATGTAATGGAAGCGTTTCAAAACCGGCCGAGTTTGGTATAAATGGTATTCGTGTAAATTATGTTTCAGAATCTTTAAGTGCCCCAGACATAATGACACTACCTACTCAATCTTCAACTGATACTGGTAAGGTATTTGGACAAGAATTTAAAGAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bff005b61eb053b3e5416979e399637668b31c9e42e4587979071e7efdffbcd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6947
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic characterization of ShigActive phages Das,C.R., Woolston,J., Li,M., Sulakvelidze,A. and Soffer,N. 2013-11-08 — GenBank