Protein

View in Explore
Genbank accession
WEL95503.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MASNLVVTPHPLTLDGQTHIPAQLLPGQSLYSFLAANAPDTLDGGWAVTIGGRQVPVEMWTKTFPKDGHLIEVRSTVDNKQAFQLIALLVLTYFTFGIGAAGGFVAAGYGAVAATAVYVAGSVIINKVLGPKPPKTPAAEESGGVYSLNGATNASRPYQALGIPFGSVAIAPDLLSKPYSYFDGDDQYLALLLTPGINVARVDDVRNGDNPFANYPGSQLFTSGMSGMPQQAIPLFTDVDSQAGGALQDEDKNPAVVVRTTPPDTVRIQVDIEYTLFGKGKKGNALYNEGTVTAEYRTAGTGSWTNLETRYVTNRDMRVHRMTLKRDVPPGQYDVRVTRSVMSLTGDNDVAQFNFTSLTSVQRDTAQYLGIARVGLLFKATGQLSGTPNEIKMQVTAKPVQTWTGTQWRIADTVDNGLSNPGAQMLAYIRGYYDEAGNLIGGMGLSDMFIDIPAFQAFILHCEANDYKYNYYLRDSRTHSEVLESIALVGFGQVTNSTGKISVAWAGANQPVTAVVGMGTIRQGQFGVDYTLSNTADGVELSYFDASIGDTSVVRVASPGVTTALNPARIQAEGITTANHAAEMARYHLGQSLYQAKDITFGADIEHITYRRLSVLSLSHDLTQWGYSGRLMAAANISGVVTLYLDTEVPPPSAGNAYVGVRIPGELSYRVMQVRPFSAPSKSIQLVGAWPIDAAFPGASSDNPAWDTTYCYDFKSSPGYTVRVVGITPDADLKGAQVSVVPESAEFWNYVKTGTYIPAPSGSGLNTRPTVSGLKIVEAQVVQGNTVFTELSATWEVSGPYARADVLMAEGSGDSLLQTSSTTRSATWRIPGAGVYTITVRPFNPDGLAGYAQSLVFATKGADAPPVNPDIFDVQQVSGGLRRYVWGFGSDIIQSADYSGVEIRYTSGSVQSPVWETMLPVAGDDGSGFHTAPFESPTPVSGTYTFSLRAVNTSGRLSDQTLTIVRALGKNLGELLDQINNDVSKAIVDAFNRDEAEARARVDAINSVIAQVQDEAEARATAVQQVTTALNQSIADQTAALLNEQLDRQAAIQTANQLRQSGDESLAYQISQISAGTGMQFDGIETWYFDTSNEGWTGSASSGFLNPGDVYATSPSGLGVNGNAYRYVKMRVKKVGTPVWAGQLGWRSAGGTWSSLALSAPTFDANGVATVDANDIPWSDTTVDQIRVKLSDTVTSSNYYLFDWIAIGRPTPGASVALVEDVRQANATALAAEAQQRNTLAVQLRGNYTGNDLAGLTSGLVYQERTARVTETSAISTRVDGMQVSLDGKASASALQTLSTKVDTIDGKVASATESVFALEAQLDGDSAGDTDWSAGDTDVYSGAKTVYSVIADADSALSRRVDTVSSDFGQFQGSATQQLQALSTAQDAQTQLYQQVSASLDTKASTSSVNLLTTRVTQAEGNIAANSQNIAQAQASIANKADASAVSALQTTVTAIDGRTTANANSITAVQAAVDGKAAASTVLELTATVNSQGSTITSINSQAFLALNANNYIGGFKIGNNGQVVDFTVLADNFRIVAPAGGARLEYSAGTLRVYDNNNVLRVELGKLS
Physico‐chemical
properties
protein length:1571 AA
molecular weight: 166415,19260 Da
isoelectric point:4,80241
aromaticity:0,08148
hydropathy:-0,11897

Domains

Domains [InterPro]
DC_0129
STR
1–1086
DC_0129 DC_0793
IPR055385
ATT
255–362
IPR055385 DC_1268
WEL95503.1
1 1571
Architecture
STR
ATT
STR
STR
STR 1-254 | ATT 255-362 | STR 363-1086 | STR 1147-1567 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XooS_NR08
[NCBI] 		2953619 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEL95503.1 [NCBI]
Genbank nucleotide accession
OQ055246.1 [NCBI]
CDS location
range 7285 -> 12000
strand +
CDS
ATGGCATCAAACTTAGTAGTTACCCCGCATCCACTAACATTGGACGGGCAGACACACATCCCGGCACAGCTGCTGCCGGGCCAATCGTTGTATAGCTTCTTGGCAGCAAATGCTCCAGACACTTTGGATGGCGGCTGGGCAGTGACTATTGGTGGTAGGCAAGTCCCGGTAGAGATGTGGACTAAGACCTTCCCCAAGGATGGTCACCTAATCGAGGTCCGCAGCACCGTTGACAATAAGCAGGCATTTCAGTTGATTGCATTGCTTGTGCTTACGTACTTCACGTTTGGTATAGGTGCAGCTGGCGGATTTGTGGCGGCAGGCTATGGTGCCGTTGCAGCAACTGCTGTGTATGTTGCTGGCTCTGTTATCATCAATAAGGTTCTTGGTCCTAAGCCGCCTAAAACGCCGGCGGCGGAAGAGTCTGGCGGTGTTTATAGCCTTAATGGTGCAACAAATGCCAGCAGGCCATACCAGGCACTGGGAATCCCTTTTGGCTCCGTCGCTATTGCACCTGACCTGCTTTCGAAGCCGTACTCTTACTTCGATGGCGATGACCAGTATCTGGCATTATTGCTCACTCCTGGTATTAATGTGGCAAGGGTTGACGATGTCCGTAATGGGGACAACCCCTTCGCAAATTATCCCGGCTCGCAGTTGTTTACATCCGGCATGTCGGGTATGCCACAACAGGCAATCCCTTTGTTCACTGACGTTGATAGCCAGGCTGGTGGGGCCTTGCAGGACGAAGATAAGAACCCTGCTGTCGTTGTAAGGACGACGCCGCCAGACACTGTTCGTATCCAGGTCGATATTGAGTACACACTCTTTGGTAAGGGCAAGAAAGGAAATGCCCTATATAATGAGGGTACAGTAACTGCCGAATATAGGACTGCTGGCACAGGGTCATGGACAAACCTAGAGACCAGGTACGTAACAAACCGCGACATGCGTGTTCATCGTATGACTCTAAAAAGGGATGTTCCGCCAGGTCAATACGATGTGCGGGTAACGCGCAGTGTTATGTCCCTCACTGGGGATAATGACGTTGCTCAGTTTAACTTCACCTCGCTAACATCCGTGCAGCGAGACACTGCACAATACCTTGGAATTGCAAGGGTTGGGCTGTTGTTCAAGGCCACCGGTCAGCTATCAGGTACGCCGAATGAGATAAAGATGCAGGTTACTGCAAAGCCAGTGCAGACATGGACTGGGACACAGTGGCGGATTGCCGATACTGTGGACAATGGACTCAGCAACCCCGGTGCACAGATGCTGGCGTATATCCGCGGCTACTATGATGAGGCGGGGAATCTGATTGGCGGTATGGGTCTGTCAGATATGTTCATTGACATACCTGCCTTCCAGGCTTTCATTCTGCACTGCGAGGCAAATGACTACAAGTACAACTACTACCTGCGTGATAGCAGGACACATAGTGAGGTGCTTGAGTCAATTGCACTTGTAGGTTTTGGTCAGGTGACGAATTCCACCGGCAAGATATCTGTTGCGTGGGCAGGTGCGAATCAGCCTGTTACTGCTGTTGTCGGCATGGGCACAATTCGCCAAGGTCAGTTTGGTGTTGACTACACACTGTCAAACACTGCGGACGGTGTCGAGCTCAGCTACTTTGACGCAAGCATCGGTGATACATCTGTTGTGCGTGTGGCATCGCCGGGTGTTACTACTGCGCTAAATCCTGCACGTATCCAAGCAGAGGGCATCACGACTGCAAATCATGCAGCAGAGATGGCACGTTATCATCTTGGTCAGTCACTGTATCAGGCAAAAGACATCACATTCGGCGCGGACATTGAGCATATCACCTACCGGCGGCTGTCGGTGTTGTCACTGTCCCACGACCTGACGCAGTGGGGTTACAGTGGCCGTTTGATGGCAGCTGCTAATATAAGCGGCGTTGTTACACTGTACCTCGACACGGAAGTTCCGCCACCTTCAGCAGGCAATGCCTATGTAGGTGTTCGGATCCCGGGTGAACTGAGTTATCGTGTTATGCAGGTGCGGCCATTCTCCGCCCCATCTAAGTCAATCCAACTTGTTGGAGCTTGGCCTATTGATGCTGCGTTCCCGGGGGCCTCAAGTGATAATCCTGCTTGGGATACCACATACTGTTATGACTTCAAGTCCAGCCCTGGATATACTGTACGTGTTGTAGGTATCACGCCTGATGCTGATCTAAAGGGTGCCCAGGTTTCTGTTGTACCTGAATCGGCGGAATTTTGGAACTATGTAAAGACAGGGACATATATACCGGCACCTAGTGGCTCGGGTCTTAATACTCGACCTACAGTAAGCGGCCTGAAGATTGTTGAGGCGCAGGTGGTACAGGGTAATACAGTATTTACCGAGCTCAGTGCGACGTGGGAAGTATCCGGGCCGTATGCAAGGGCTGACGTGTTGATGGCGGAAGGCTCGGGGGACAGCTTGTTGCAAACGTCCTCGACCACTCGCTCGGCAACATGGAGGATTCCGGGTGCAGGTGTATACACAATTACTGTCAGGCCATTTAATCCAGATGGTCTAGCAGGATACGCACAAAGCCTTGTATTCGCTACTAAGGGTGCAGATGCCCCGCCAGTCAATCCAGACATCTTTGATGTCCAGCAAGTGTCGGGAGGTCTGCGGAGGTATGTGTGGGGGTTTGGGTCGGATATCATCCAAAGTGCTGACTATTCAGGTGTTGAGATCAGGTATACCTCAGGATCTGTACAGTCTCCGGTATGGGAGACTATGCTGCCTGTGGCGGGTGATGATGGGAGTGGTTTCCACACTGCGCCCTTTGAGTCGCCTACGCCTGTATCCGGGACCTACACATTCTCGCTGCGTGCAGTAAATACATCTGGCCGTCTATCGGATCAAACTCTGACTATTGTAAGGGCGCTCGGCAAAAACCTTGGGGAGCTTCTAGATCAGATCAACAATGATGTCTCTAAGGCAATTGTCGATGCGTTCAATCGAGATGAGGCTGAGGCCCGTGCGCGTGTGGATGCCATCAATTCTGTTATCGCACAGGTGCAGGATGAGGCCGAAGCACGAGCTACAGCAGTTCAGCAGGTAACTACTGCTCTCAATCAATCGATTGCAGATCAGACAGCAGCGCTGCTTAATGAGCAGCTTGACAGACAGGCGGCAATACAGACTGCCAATCAGTTGAGGCAATCTGGTGACGAGTCTTTGGCTTACCAGATCTCACAGATTAGTGCCGGTACAGGCATGCAGTTTGATGGGATTGAGACTTGGTACTTCGACACGAGTAACGAAGGCTGGACCGGCAGTGCATCTTCTGGCTTCCTGAATCCCGGTGACGTGTATGCAACCTCGCCATCAGGCCTTGGTGTAAATGGGAATGCCTATAGGTATGTGAAGATGCGGGTCAAAAAGGTGGGAACACCTGTTTGGGCTGGCCAGCTTGGTTGGCGGAGTGCAGGCGGGACATGGTCCTCGCTGGCACTGTCAGCTCCTACCTTTGATGCAAATGGGGTGGCAACAGTAGATGCTAATGATATCCCGTGGTCTGACACAACAGTTGACCAGATTAGGGTCAAGTTGTCAGACACCGTCACCTCTAGCAACTACTACTTATTTGACTGGATAGCTATTGGTCGCCCCACACCTGGTGCATCTGTGGCGTTGGTCGAAGATGTCCGTCAGGCTAATGCAACTGCCTTGGCAGCGGAGGCTCAGCAGCGCAATACTCTGGCTGTACAGTTGAGAGGCAACTACACTGGCAACGACCTTGCTGGGTTGACTAGTGGTCTCGTTTACCAAGAGAGGACAGCACGTGTTACAGAGACATCGGCCATTAGTACGCGGGTCGATGGTATGCAAGTATCTCTGGATGGCAAGGCATCCGCCTCTGCTCTACAGACCCTTTCCACAAAGGTTGATACCATTGATGGTAAGGTGGCCAGCGCAACTGAGTCTGTGTTTGCACTAGAGGCACAGCTAGATGGCGATAGTGCCGGTGATACTGATTGGTCCGCTGGTGATACGGATGTGTATTCAGGTGCTAAGACTGTTTATAGCGTGATTGCTGATGCTGATAGTGCATTGTCGAGGCGTGTTGACACTGTGTCGTCTGACTTTGGTCAATTCCAGGGTTCAGCGACGCAGCAGCTTCAGGCCCTTTCAACCGCACAGGATGCACAGACTCAGCTATACCAGCAGGTGTCAGCATCTCTGGACACAAAGGCCAGTACGTCCTCTGTTAATCTGCTTACAACCAGGGTGACACAGGCTGAGGGCAACATAGCTGCGAACTCTCAGAATATTGCACAGGCTCAGGCATCAATTGCAAATAAGGCTGATGCGAGTGCAGTAAGTGCTCTGCAAACAACCGTCACGGCAATTGACGGTAGGACTACGGCCAATGCAAACTCAATCACGGCAGTGCAAGCTGCGGTCGATGGCAAGGCAGCTGCAAGCACGGTACTGGAGCTAACAGCTACGGTTAACTCGCAAGGCTCTACCATTACGTCTATCAACTCCCAGGCATTTTTGGCCCTTAATGCTAATAACTATATTGGCGGGTTCAAGATTGGCAATAATGGCCAGGTGGTGGACTTCACGGTATTGGCAGACAACTTTAGGATTGTGGCGCCTGCTGGCGGTGCAAGGCTGGAATACAGTGCTGGTACACTGAGGGTATATGACAACAACAATGTGCTGCGAGTTGAGCTGGGTAAACTGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4cd71868acf6b1795707e7c08b7fd234bbc4eb1492955d4e34ebef0c2e032832
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophages infecting Xanthomonas oryzae pv. oryzae and genomic characterization of novel phage vB_XooS_NR08 for biocontrol of bacterial leaf blight of rice Jain,L., Kumar,V., Jain,S.K. and Kaushal,P. 2023 37007514 GenBank