Protein

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Genbank accession
ABY63264.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRIDLTNYNTTADSTINIYRSYETFTYDKCPTPLVSLPATTTEYHDTTVELNRLVYYRIGVVHNASEIVGPMYTTMKKYFTGPQVNPDSTVPDMILRGDAKVGRYGSIPLNTVYPVSQLPVDFPNIPWIEGVDHANTNVEKCLIDDKVLFITDVPVVQGSLEELYKAGALFSSGDGKDQLNAVLYNSITTKVQQGRKVHANGFTYRFRLMTENEFNQLYIKLYPSSVLGNQQEVAISNNNPHTYSSPVVTSSRMTEADNLSVDLAGNQILIDWNGVHPLFMVLELVSRSDTAFPDSDVVVKPTLPEDRMMMCGAEVVNNRVHFFGGISTTFTTGLDASTRHISFDLNGEDEQIHAPLPVGVYQPVTWVYNNKIYCFGGVKRIGTTEWSYQELYNDVQVWEDNGTPEGLWTTLTTNVTFGFGSSGTVYFDTALNKDMIFIFGAYYTEQPTIASTYYSAEAATFDGTLQTGTTGMPSTSGGAAVGAYAGYLMEVGGTRSANGYTNAAYRKALPLNPPNSFYMSSITTQGTELPVTKGGKLFTWRDTLFLVTSASIPSDEAKFYVYQWLPNESRWLKVMADVPSIGAQKRFKGTSTFHNNRIYTMLSQPWLNDTSDSILLVLDLADPLETVLKPINTIAPQVDRIYPPYAKVVVQ
Physico‐chemical
properties
protein length:652 AA
molecular weight: 72420,73510 Da
isoelectric point:4,99827
aromaticity:0,11350
hydropathy:-0,20061

Domains

Domains [InterPro]
DC_1242
ATT
1–214
DC_1242 IPR015915 DC_2226
IPR015915
STR
300–550
IPR015915
IPR015915
STR
302–501
IPR015915
ABY63264.1
1 652
Architecture
ATT
STR
RBD
ATT 1-214 | STR 291-550 | RBD 566-651 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABY63264.1
1 652
Domain Start End Length (AA) Confidence
N-terminal 1 295 295 0,3641
Central domain 296 496 202 0,6158
C-terminal 497 652 155 0,2581
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-295
Central
296-496
C-terminal
497-652

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 201phi2-1
[NCBI] 		198110 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas chlororaphis
[NCBI] 		587753 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABY63264.1 [NCBI]
Genbank nucleotide accession
EU197055 [NCBI]
CDS location
range 295877 -> 297835
strand -
CDS
ATGCGTATTGACTTGACGAATTACAATACGACTGCCGATAGCACAATTAATATTTATCGCAGTTACGAAACGTTCACTTATGATAAGTGTCCTACTCCCCTGGTATCTTTACCCGCCACTACAACCGAGTACCATGATACCACAGTTGAACTTAATCGACTAGTGTATTACCGGATTGGTGTAGTGCACAACGCATCTGAGATCGTTGGTCCGATGTACACGACCATGAAGAAATACTTCACGGGTCCTCAGGTCAATCCAGATAGTACCGTTCCCGATATGATCTTAAGGGGTGATGCTAAAGTAGGACGCTATGGATCGATTCCACTTAACACGGTTTATCCAGTTAGTCAGTTACCTGTAGACTTTCCTAATATCCCATGGATCGAAGGGGTCGATCATGCTAACACAAACGTTGAGAAATGTTTGATTGATGACAAGGTACTTTTTATTACAGACGTACCCGTGGTACAAGGTTCTTTGGAAGAGCTTTATAAAGCAGGTGCATTATTTAGCAGTGGCGATGGTAAGGACCAGCTTAATGCGGTTTTATATAACTCCATCACAACTAAAGTGCAGCAAGGTCGTAAGGTACATGCTAATGGATTTACCTACCGATTCAGATTGATGACTGAGAACGAGTTCAATCAACTCTATATCAAACTGTATCCATCATCGGTATTGGGTAATCAACAGGAAGTTGCGATCTCTAATAACAATCCACATACCTACAGTTCACCTGTTGTTACTTCAAGTCGTATGACCGAAGCAGATAACCTTAGTGTCGATCTTGCCGGCAATCAAATACTAATTGATTGGAATGGTGTGCACCCATTGTTCATGGTGTTGGAATTGGTTAGTCGGAGTGACACAGCCTTTCCAGATTCTGATGTAGTGGTTAAACCTACTCTACCTGAAGACCGGATGATGATGTGTGGTGCAGAAGTTGTTAACAACCGAGTTCACTTCTTCGGTGGTATTTCAACCACCTTCACTACCGGGTTAGATGCATCTACCAGGCACATCAGTTTTGATTTGAATGGTGAGGACGAACAAATCCATGCACCGCTACCAGTTGGAGTTTACCAGCCAGTAACGTGGGTCTATAACAATAAGATTTATTGTTTTGGTGGTGTGAAGCGCATTGGCACGACCGAGTGGAGTTATCAAGAACTCTACAACGACGTTCAAGTCTGGGAGGACAATGGTACACCGGAAGGGTTGTGGACTACACTGACTACCAACGTTACATTTGGCTTTGGTTCCAGTGGTACGGTCTACTTCGATACGGCTCTAAATAAAGATATGATCTTTATCTTCGGAGCTTATTACACCGAACAACCCACCATAGCTAGTACTTACTACTCCGCCGAAGCGGCTACGTTTGACGGTACTCTGCAAACAGGTACTACGGGAATGCCATCAACCTCCGGCGGTGCAGCTGTTGGGGCATACGCTGGATATCTGATGGAGGTCGGCGGCACGCGTTCAGCTAATGGTTATACGAACGCAGCTTATCGTAAAGCTTTACCGCTGAACCCACCGAACTCGTTCTATATGTCGAGCATCACAACCCAAGGTACCGAACTGCCAGTCACCAAAGGCGGTAAGTTATTTACATGGCGTGACACATTGTTCTTGGTTACCAGCGCAAGTATTCCGTCAGACGAAGCTAAGTTCTATGTTTATCAGTGGTTACCAAATGAATCCAGATGGCTGAAAGTTATGGCCGACGTACCTAGCATCGGTGCACAGAAGCGATTCAAAGGTACGTCCACTTTCCACAACAATCGAATCTACACAATGCTTAGCCAACCATGGTTGAATGACACCTCGGATTCGATATTGTTGGTTCTGGATCTGGCAGATCCATTGGAGACAGTCCTCAAACCTATCAATACGATCGCACCGCAAGTTGATCGTATCTACCCTCCGTATGCTAAGGTGGTGGTCCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ea671ba3fa145451b80edb57cd1cf97bab9f1820b7c2e2781b348baaa130789
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50