Protein

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Genbank accession

XUY43769.1 [GenBank]

Protein name

tail protein

RBP type

TSP

Evidence RBPdetect2

Probability 0,74

Protein sequence

MFPIPIFTIMTSTGVVPLPAGIVKKVITLDYPDNAGNSNSSLAILLNDGRLFTQGANLFGEIADGTRSARFNNFYLASTVVADVFTADRCFVIKTNSGGWQYSGLTAGLVGSIAAGGTDACVTTWTSFPSVITGTISLANLKEVKGGYNNTLWLMNSGVLYGSGQNTIGSLGASTTNEVSTPRQITSSAVAFDAGYNQCSYVNNAGTLRVCGASKGLAGNNNTTTAFVNATISATETVYVKDYINTVSQTIVVGDTSGGTGTVNYLYVRSNTETTYTKLDTFAAGFSTWKFPPSRHSFFVGINNSLWAIGKNYTANLGLGYDSASGDPLQVGKPVKPEGVGSWDINKLTSVHTLNMDVTNQLGYQGTFFVYNGDMYYSGIWKDGKASYLFNSGLNYNKFTPIASSVITGDVLATSLTTDSLGVCIVGGTKQLTHSVSPEGGKLFNIKYTSSAPANMTISSTGLMTFQAEGGFDAGMTALNAEGTTLSDTSGGYASTLSVYTPSLSAMDVGTTQTMVAEITPTGAASLSGMVVEYTTTDPNVATVDPTTGVITGVGDGGCRIGCTATYQGVVTASDSSYLTVNAVAGKELAPSPSSSLTVLNGYFNHSADGAITFPTLSGTVTPANFVVKVDDVVVPSSKVIFRNKAFSTVDSYPAGEYRLAIEFASASVVNTVDVSMQANPDLLELWGGNRISYSTSPTSQFLKGCANLRRITSDCFSNTSYTGTSISGIFSGCTSLIAIPEGLFSDTLFPSMTTMSNTFEGCTSLTSIPSDLFKNLSKVTRYSYTFKDCTSLAEVPAGMFDNIPTKVTSLTATFQGCLALTDFNKIFNDNLGLTVCGQRGALSSFFSGCTNLTGTGVTLTSTLGGAANSYLFRYCTKLSDYNNIPSGYK

Physico‐chemical properties

protein length:	890 AA
molecular weight:	93273,41650 Da
isoelectric point:	5,10797
aromaticity:	0,10000
hydropathy:	0,07427

Domains

Domains [InterPro]

DC_0065
STR
1–292

DC_0065 DC_0179 IPR008964 DC_0356 IPR032675

IPR009091
STR
34–355

IPR009091 DC_1711 DC_0669 DC_0669

IPR009091
STR
39–333

IPR009091 G3DSA:2.60.40.1080

IPR003343
STR
505–565

IPR003343

XUY43769.1

1 890

Architecture

STR

STR 1-668 | STR 678-889 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0065	STR	DC_0065	1	292	Novel HMM	DC_0065	Central	Low	Positional only	140 proteins / 140 hits
IPR009091	STR	IPR009091	34	355	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	39	333	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
DC_0179	STR	DC_0179	340	500	Novel HMM	DC_0179	Central	Low	Positional only	58 proteins / 58 hits
DC_1711	RBD	DC_1711	482	585	Novel HMM	DC_1711	C-terminal	Low	Positional only	141 proteins / 141 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	493	583	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR008964	RBD	IPR008964	502	571	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	505	565	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
DC_0356	STR	DC_0356	585	668	Novel HMM	DC_0356	Central	Low	Positional only	24 proteins / 24 hits
IPR032675	STR	IPR032675	678	883	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
DC_0669	RBD	DC_0669	690	825	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits
DC_0669	RBD	DC_0669	825	889	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XUY43769.1

1 890

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	24	24	0,6631
Central domain	25	245	222	0,6201
C-terminal	246	890	644	0,0668

Note: Constraints were applied during segmentation.
Fixed 22 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-24

Central
25-245

C-terminal
246-890

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage WPEC2 [NCBI]	3434033	Viruses >
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XUY43769.1 [NCBI]

Genbank nucleotide accession

PV691511 [NCBI]

CDS location

range 83584 -> 86256
strand +

CDS

ATGTTTCCAATTCCAATATTTACTATTATGACCAGCACTGGTGTAGTTCCTCTGCCAGCAGGTATTGTTAAAAAAGTAATCACTTTAGATTACCCAGATAATGCTGGTAATTCTAACAGTAGTTTAGCAATTTTGCTTAATGATGGTAGATTGTTTACTCAAGGCGCAAACCTTTTTGGTGAGATTGCAGATGGAACTCGTAGTGCACGATTCAATAATTTCTACTTAGCTTCTACTGTAGTAGCGGATGTGTTTACCGCAGATCGTTGTTTTGTTATTAAAACTAACAGTGGGGGATGGCAATATTCAGGATTGACAGCAGGATTGGTAGGATCTATAGCAGCAGGTGGTACGGATGCATGTGTAACTACTTGGACCAGCTTTCCATCTGTGATAACAGGGACTATCTCTTTAGCCAATCTTAAAGAGGTTAAGGGAGGATACAACAACACCCTCTGGTTAATGAATAGTGGTGTTCTTTATGGATCTGGTCAAAACACAATAGGTAGTTTAGGTGCAAGTACTACTAACGAAGTTTCTACTCCTCGTCAGATAACAAGTTCAGCGGTTGCTTTTGATGCAGGTTACAACCAATGTTCTTATGTCAACAATGCTGGAACCTTGCGTGTTTGTGGAGCCAGTAAAGGTTTAGCAGGTAATAATAACACAACAACAGCTTTTGTCAATGCTACGATATCTGCTACTGAAACAGTGTATGTCAAAGATTACATTAATACAGTTTCCCAGACAATAGTTGTAGGAGATACCTCCGGTGGCACGGGTACAGTAAACTACTTATATGTTAGATCTAATACAGAAACAACTTACACTAAACTGGACACCTTTGCAGCAGGTTTCTCCACATGGAAATTTCCACCAAGCCGCCACTCTTTTTTCGTTGGGATCAATAATTCCTTGTGGGCTATTGGTAAGAACTATACTGCAAACTTAGGTTTGGGGTATGATTCTGCGAGCGGAGATCCCCTCCAAGTAGGAAAACCAGTTAAACCTGAAGGAGTGGGTTCCTGGGATATAAATAAGCTCACAAGCGTTCATACGCTGAATATGGATGTTACTAACCAATTAGGTTATCAAGGAACCTTTTTCGTTTATAATGGAGATATGTATTATTCCGGTATTTGGAAAGATGGGAAAGCCTCGTACCTGTTCAATAGTGGTCTAAACTATAATAAATTCACACCAATAGCAAGCTCTGTGATTACTGGGGATGTGCTGGCAACTAGCTTAACTACAGATTCTTTAGGAGTTTGTATTGTAGGTGGAACTAAACAGTTGACACATTCTGTTAGCCCAGAAGGAGGTAAACTTTTCAATATTAAATACACTTCTTCTGCCCCTGCAAACATGACAATATCGTCTACTGGCTTAATGACTTTCCAAGCAGAAGGTGGTTTTGATGCAGGTATGACAGCCTTAAACGCTGAAGGAACAACTTTATCAGATACCTCTGGAGGATATGCTTCAACATTAAGTGTTTACACTCCTAGCTTATCTGCGATGGATGTAGGAACAACACAAACAATGGTAGCAGAAATAACGCCAACAGGAGCAGCAAGCTTATCTGGCATGGTTGTAGAGTATACAACTACAGATCCTAATGTTGCTACAGTAGATCCTACAACTGGCGTAATAACTGGTGTTGGTGACGGTGGTTGTAGGATTGGTTGCACAGCTACGTATCAAGGTGTTGTTACCGCTTCTGATAGTTCTTATTTAACGGTGAATGCTGTTGCGGGAAAGGAGTTAGCTCCATCTCCGAGTAGTAGTTTAACGGTTCTAAACGGATATTTCAACCACTCGGCAGATGGGGCGATTACGTTCCCAACTTTATCGGGTACTGTCACACCAGCTAACTTTGTAGTTAAGGTGGATGACGTTGTAGTTCCTTCAAGTAAAGTAATATTTAGAAATAAAGCTTTCTCTACAGTGGATAGTTATCCAGCAGGAGAATATAGACTGGCTATTGAATTTGCAAGTGCTTCAGTAGTTAATACTGTTGATGTGTCTATGCAAGCAAACCCAGATCTTTTAGAATTATGGGGCGGAAACAGGATTAGTTATTCTACAAGCCCAACCTCACAATTCTTAAAAGGTTGTGCTAACTTAAGACGAATAACCTCTGATTGTTTTAGTAACACATCTTACACCGGAACATCTATAAGTGGTATCTTCTCTGGCTGCACAAGTTTGATAGCTATCCCTGAAGGATTATTCAGTGATACTTTATTTCCTTCGATGACAACAATGTCAAACACGTTTGAAGGTTGTACATCTTTAACATCTATTCCTTCAGATTTATTTAAGAATCTATCAAAAGTTACAAGATATTCTTACACCTTTAAAGATTGCACCTCGCTTGCAGAAGTTCCAGCAGGAATGTTTGATAATATTCCAACTAAAGTGACCTCTTTAACAGCTACATTCCAAGGTTGTTTAGCACTTACAGATTTTAATAAAATCTTTAATGACAACCTAGGGTTAACGGTTTGTGGTCAACGTGGAGCATTATCTTCTTTCTTTAGTGGATGCACAAATCTTACAGGAACAGGAGTAACATTAACAAGCACATTAGGTGGAGCAGCTAATAGTTACCTATTTAGGTATTGCACAAAACTTTCTGATTATAACAATATTCCTTCGGGTTATAAATAA

Genome Context

Tertiary structure

PDB ID

50097f47927e3a4dafb64a1689025414fdbf367fade74a002e8045309dbefae5

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7986

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence