Protein

Genbank accession
AFX93505.1 [GenBank]
Protein name
putative pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVTKNTSYHPLMGDVEPATYYRRGSFQDGGFVQIPDDIIKHSDGNWYRYKNAIPAGGVPVLPGTSPDSNWELVGLRGDVVDRLGTTSGFRFVGQAASIAEVRAIEPTKPNERILMKQYGPIKGVGGGEFWYDELDTTTADNGGTILVTAGGKRWKKIMKDTGYSAEDFGADPNGVADSRAAIQAAIDFVGTLKNKILYLTGTYRIEGDTTITLANGVQLLGTRRGMTQGPQTILGDTMKVVNDTTFHVAMTPGKTTPLFTAGRDAVFSGFSVVYINQPKEAATINDILTYGPTIWASHSCSVVNVRYVAAWDFFNGRGEAHFLSDIYGYAFNVDFHIEMCADVTRLKNIHINSNVYRPGWSILDVAAPRVTSRAFEMVQHDGIMFEGIHVFAKGTVWHNRQNSTARLCSLNGTDFLFDKCGTMLDSDVNGGVCCSLSNGVFIHDYHTNEGAALNLTNPVGTQVTSYYLTDWKWQLGSAGTSPGQGSWAANWMNFNSAAGTRVWLDNINILAMGTLALNNNAQFNRVEGSVTIGTRKINFRPQNANLVENHRLVSIDPFTNIPYGFTKLGTAVTVSGRNVTSTAATSPTGLGISTRVAQTFPSSCAVWVYASQKGDSSGILVTAYLAGFTNPITFSAQWEAMGNSWLARLEVPSSAGRTHWDITANAPSATGGTLTIQSVHMIAGTTLEFSPESDSVAIHTNQVGAMRGKMTLVANVPQELPSAHFGGDRGVISLYVKSATVVGYWVLNKRLIGDTGTVTQIAYAAGAETITVDWPAGSGAKPRVMSTAGGDVDVTITGV
Physico‐chemical
properties
protein length:799 AA
molecular weight: 85896,66330 Da
isoelectric point:6,38924
aromaticity:0,09512
hydropathy:-0,10275

Domains

Domains [InterPro]
cd20481
91–602
cd20481
IPR011050
161–516
IPR011050
IPR012334
163–456
IPR012334
IPR024535
165–229
IPR024535
AFX93505.1
1 799
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage phiMAM1
[NCBI] 		1262513 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia sp.
[NCBI] 		616 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Serratia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFX93505.1 [NCBI]
Genbank nucleotide accession
JX878496 [NCBI]
CDS location
range 32722 -> 35121
strand +
CDS
ATGGTCACCAAAAATACTTCGTACCACCCGCTCATGGGTGACGTCGAACCAGCTACATACTACCGCCGGGGTTCGTTCCAGGATGGTGGTTTTGTTCAAATCCCAGATGACATAATCAAACACTCTGACGGAAACTGGTATCGCTACAAGAATGCTATCCCAGCTGGCGGTGTTCCGGTGCTTCCAGGGACTTCTCCGGACTCTAATTGGGAGTTGGTAGGGTTACGTGGGGATGTGGTAGATCGCCTCGGTACGACCAGCGGGTTCCGTTTTGTTGGACAAGCTGCCAGTATCGCTGAAGTCCGTGCCATTGAGCCAACCAAACCCAACGAACGGATACTGATGAAGCAGTATGGTCCGATCAAAGGTGTGGGTGGTGGTGAATTCTGGTATGACGAACTGGATACCACCACTGCAGACAATGGTGGTACTATCCTCGTGACTGCTGGAGGCAAACGCTGGAAGAAGATCATGAAGGATACCGGGTACTCGGCTGAAGACTTCGGAGCTGACCCAAATGGGGTGGCCGACTCCCGTGCTGCTATCCAAGCCGCAATTGACTTCGTCGGCACTCTGAAGAATAAGATCCTGTATCTGACTGGCACTTACCGGATTGAAGGCGACACGACCATCACCTTGGCCAATGGCGTACAATTGCTGGGTACTCGTCGTGGTATGACCCAGGGACCACAGACTATTCTCGGTGATACGATGAAGGTGGTCAATGACACGACCTTCCATGTTGCCATGACTCCAGGCAAAACCACACCGCTATTCACCGCCGGGCGTGATGCTGTGTTCTCTGGGTTTTCCGTCGTGTATATCAACCAGCCGAAAGAAGCCGCGACCATCAACGATATCTTGACTTATGGTCCGACGATTTGGGCAAGTCACTCTTGCTCGGTTGTGAATGTTCGCTATGTCGCTGCCTGGGACTTCTTCAACGGTCGGGGTGAAGCACATTTCCTCAGTGATATCTACGGCTACGCCTTCAACGTTGACTTCCATATTGAAATGTGTGCTGACGTCACGCGCCTGAAGAACATCCACATCAACTCAAACGTTTACCGTCCTGGCTGGTCTATCTTGGATGTGGCTGCACCGCGCGTTACCAGCCGAGCATTCGAAATGGTACAACATGACGGCATCATGTTCGAAGGGATTCACGTGTTCGCCAAGGGTACAGTCTGGCACAACCGCCAAAACAGCACTGCGCGTCTCTGTTCCCTGAACGGTACGGACTTCTTGTTTGATAAATGCGGTACAATGCTGGACTCTGATGTCAACGGCGGCGTCTGCTGCTCCCTGTCCAACGGGGTGTTTATCCATGACTACCACACCAACGAAGGAGCTGCACTGAACCTGACCAACCCGGTAGGCACTCAGGTAACTTCTTACTATCTGACGGATTGGAAATGGCAGCTGGGTTCGGCTGGTACGTCCCCAGGACAAGGCTCTTGGGCGGCAAACTGGATGAACTTCAACAGCGCAGCAGGTACTCGTGTGTGGCTGGATAATATCAACATCCTGGCCATGGGGACTCTTGCCCTTAACAACAATGCCCAATTCAACCGGGTCGAGGGTAGTGTCACCATCGGCACACGCAAAATTAATTTCAGACCTCAGAACGCCAACCTGGTAGAGAACCATCGACTGGTGTCCATAGATCCGTTCACCAATATCCCATATGGCTTCACCAAACTGGGTACTGCTGTGACCGTGTCAGGGCGTAACGTGACCAGCACTGCCGCAACTTCACCAACTGGACTGGGAATCAGCACTCGCGTTGCTCAGACTTTCCCTTCGTCTTGTGCAGTTTGGGTATACGCCAGCCAGAAAGGTGATAGCTCTGGTATTCTGGTGACAGCTTATCTTGCCGGGTTTACCAACCCGATAACGTTCTCAGCGCAATGGGAAGCCATGGGCAACTCATGGTTGGCGCGCCTGGAGGTTCCGAGTAGTGCCGGGCGTACTCATTGGGATATCACAGCAAACGCCCCTTCAGCCACTGGTGGTACGCTGACAATCCAAAGCGTCCATATGATCGCAGGCACGACTCTGGAATTCTCACCAGAATCCGATTCGGTGGCGATCCATACGAACCAAGTGGGCGCAATGCGTGGTAAAATGACCTTGGTGGCCAACGTTCCTCAGGAGCTACCATCGGCTCACTTCGGGGGTGATCGTGGAGTGATATCCCTTTATGTGAAGTCTGCAACCGTCGTTGGCTATTGGGTGTTGAACAAGCGACTGATCGGTGACACGGGTACAGTGACACAGATAGCCTATGCGGCAGGGGCTGAGACAATTACTGTGGATTGGCCTGCAGGTAGCGGGGCGAAGCCAAGGGTGATGTCTACTGCTGGCGGTGACGTGGATGTCACGATAACCGGTGTCTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
89f50bfe28a21602da88a6b448f6023927d20f4a0f21df9a1f35ede781121219
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7407
Evidence 0,7407
Download PDB

Literature

No literature entries available.