Protein

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Genbank accession
YP_009146086.1 [GenBank]
Protein name
tail length tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMTGITKSMDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRALGNTARGFNDTTTAAGRASRAIGNTSGSARGATRDFAAMAKVGGGLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLEKRNKLKADLDKRMQQADASTAGAIRLVAQGAPVGLAAGGFEVGGVRIGSSEENQKFIADTAALALQVERLDKEVEDSTGNLNAWKSAYQAAGAAAAKSNTEFQKQINLQKDANDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTGNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIEGEIAKIQLERIKITNQGMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTVEKEKYEWYSKQVDKHKEAEQSRRAQAQIEREIWKFRQDQQMEMAAGREEEQQRKFTANPLMGAAERIKEQIQLFEDLKQKTLGNAAAQLEYNKKLAETRAQLAALRVQRDAEMQSSVGAAVGATYTPTTGLTGEDKNFADMQNRMASYDQAISKLSELNSEATAVAQSMGNLTNAMIQFSQGSLDTTSLVAAGMQTVSSMIQYSVGQQVSAIDAAIAAEQKRDGKSEQSKAKIKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMVAAGLAGAMALAQASSASGMSSIGDSGAETAGYLTLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKGTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1235 AA
molecular weight: 132791,64020 Da
isoelectric point:5,84512
aromaticity:0,05263
hydropathy:-0,42340

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 IPR056208
Coil
Unmapped
586–613
Coil Coil Coil
YP_009146086.1
1 1235
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1197 | TAS 1198-1233 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Stitch
[NCBI] 		2991861 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus stitch
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009146086.1 [NCBI]
Genbank nucleotide accession
NC_027297 [NCBI]
CDS location
range 95230 -> 98937
strand -
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATTGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAGCAGTTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCGGCGGATAGAGCAGCTAAAAGTCTAACTAAAATGCAGGCTAGTAGAGGCATGACTGGTATCACCAAATCTATGGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATCGAGGTATCCGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCGATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATACGATACTAACCGAGCACTAGGTAATACTGCTAGAGGCTTTAATGATACAACTACCGCTGCAGGACGTGCTAGTCGTGCCATTGGTAATACTTCTGGTTCCGCACGTGGTGCAACTCGTGACTTCGCAGCTATGGCTAAAGTGGGTGGTGGTTTACCTCTTATGTACGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAGCTTAAGATGGGTGACCAGTTAAACCGTCTTGAGAAGTTTGGTACTATTGTTGGTACTCAAACAGGTACTCCGGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCTTTCGAGGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCGGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAACGATGCTTATGCTGATTACGTTAAACAGCTAAATGCTGCTAACACAGGTATTACATATAACGTCAATAGTCTTTCTACTTTTCAGAAGCAACAAGCATATGCTAACGCAGTAATCGCTGAATCTACTAAACGTTTCGGCTACCTGGATGATGTACTTCGTGCAACCCCTTGGGAACAGTTTGCTGCTAATGCTGATGCTGCATTGAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCGGTAATTGATTCTATTAACGCAGTATTCTATACTTCTCAAGCATCTATCTCAGCTTCTGCTGCTAGAGCACAGGAAGAAACTAACCGTCAGATTGACCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCTGAGGAAGGATATAATAAAGCTCTTGATATGTACAAAGAATCTCTAGAAAAGCGTAATAAGTTAAAAGCTGATCTAGATAAGCGTATGCAGCAAGCAGATGCATCTACAGCAGGGGCTATTCGTTTAGTTGCTCAAGGTGCACCGGTAGGGTTAGCTGCAGGAGGTTTTGAAGTAGGAGGAGTTCGCATAGGATCTTCTGAAGAAAACCAGAAATTCATTGCAGATACTGCTGCATTAGCTCTCCAGGTAGAGCGTCTTGATAAGGAAGTAGAGGATTCAACGGGCAATCTTAATGCATGGAAATCGGCATACCAAGCTGCTGGTGCTGCCGCAGCCAAATCTAATACAGAATTCCAGAAGCAAATTAACCTACAGAAAGATGCAAATGACCCGGATGCGGTTTATGACTTTAACTCTGCAACTCTGAAAGGATTGACAGAACAGCAGAAAGCGTATGACCAAGCTAAGAAAACTGCCAGTGACTTAGCTAACGATATCCAGAACATTGCTCAGAATACTAATACTGCAGCTAAAACTAGTGCATCCTTATCAGATACGATTAAGACTATTGAGTCTCTGTCCGCGGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGCCTGAACTTAGGATATAATACTCTTAGTGAAATGAAGACTGCTTCACAAGCACTTGCTGGTTATGTAAAATTAACTGGTAACGAGACTAAGAATCAGTTAGAAGTTCAGCAGAAGATTGCCGAAGTGTACAACCAGACTAAGGACAAAGAGAAAGCTCAGGAAGCTGGTAGACGTCTGGAAATCCAACAGTTAGAAGAACAGGAAGCAGCTCTTAAGCGTGTCCTAGAAACTAACAAAGGTAACAAAGCAATCGAAGGTGAGATAGCTAAGATTCAGCTAGAACGTATCAAGATCACTAACCAGGGTATGGAAGCTCAGAAGAAGGTTAAGGATTATACCGATAAGATTCTTGGTGTTGATCGTGAAATTGCTCTCCTGAATAACCGTACTATGACAGATACTCAGTATCGCTTAGCTCAGTTGAACCTTGAACTGACCGTCGAGAAAGAAAAGTATGAATGGTACTCCAAACAGGTTGATAAGCATAAGGAAGCTGAACAATCAAGACGTGCTCAGGCACAAATTGAACGTGAAATCTGGAAATTCCGTCAGGATCAGCAAATGGAAATGGCTGCTGGCAGGGAAGAGGAGCAACAAAGGAAGTTTACCGCAAATCCTTTAATGGGAGCTGCGGAACGTATCAAGGAGCAAATCCAGCTATTCGAAGACCTTAAGCAAAAAACTTTAGGGAATGCTGCTGCTCAGTTAGAGTATAATAAAAAGCTAGCAGAAACTAGAGCCCAGCTTGCAGCTCTAAGAGTACAGCGTGATGCAGAAATGCAGTCTTCTGTAGGTGCGGCTGTAGGGGCTACGTATACTCCTACTACTGGATTAACTGGAGAAGATAAAAACTTCGCAGATATGCAGAATAGAATGGCATCCTATGACCAGGCTATTTCTAAGCTGTCTGAACTGAACTCCGAAGCAACTGCTGTAGCACAAAGCATGGGTAACCTAACCAACGCTATGATCCAGTTCTCACAAGGATCTCTGGATACCACTTCTCTAGTAGCGGCTGGTATGCAAACTGTGTCTTCAATGATTCAGTATAGTGTTGGTCAACAGGTAAGTGCTATTGATGCAGCTATTGCAGCAGAACAGAAACGTGATGGTAAATCTGAGCAATCCAAAGCTAAGATCAAGAAGTTAGAGGCTGAAAAGCTCAAGATCCAGCAAGATGCAGCTAAGAAGCAAATCATTATCCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCGTATCCATTCTCTATTCCTCTGATGGTTGCGGCTGGTTTAGCAGGTGCTATGGCTCTTGCTCAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGAGACTCTGGTGCTGAGACAGCTGGTTACTTAACTCTTGGAGAGCGCCAGAAGAACGTAGACGTTTCTATGTCGGCTAACGCAGGTGAACTTTCTTATATTCGAGGAGATCAAGGTATTGGTAATGCTAACTCTTTCGTACCTCGTGCAGAAGGGGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACCCCTACTGATGAACTCAAAGGATCTTCAAAAGGCACATCGGGTAGACCTATTGTGCTGAACATCAGTACGATGGATGCGGCTAGCTTCCGAGATTTTGCTTCGAGCAATAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTCAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5deacc6fec339e9af364283339d6bdfafb71d75c66fdd53b1834f2fa3eed95f4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4165
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50