Protein

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Genbank accession
AXF41170.1 [GenBank]
Protein name
unknown
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MDTISDANLSGEAILPVVVSDPLIPNRKAKVNQLFRGVAQGTKASPGLCFDLDRDSGLYQSAYDQIGVAFGDGGLYFSRVSNTATSSSLFVTAVDDTATNTDIVFAPKGTGTVKVTGLFTIDDGSFILEDAQGPKARFEVSNVGTGTNTRIFTLPAITSGNGTVLIGDDTQQTLRNKTILIDEDNLVITDGTEEAIFQINWVDTSNARRSYFLPDAGTVTTTVEPTATASTLLDTKAEQTALSKTLVNLKLAKDAEVATNWAQFNTTALSANRTLTVPDLSGILAFTDATQVLQNKTVENLILQDPTDTSKKITFSVANSNTFTNVTVQIPPTANLNSTGVPNTLATEAATQELSNKTLINPVLKGAGSQTVGSVTLSIDNMTANRTIRFPDSDATLLSTENVTFDDVTFGAGISAANLTGRTRQQQFFYAGF
Physico‐chemical
properties
protein length:433 AA
molecular weight: 45902,54400 Da
isoelectric point:4,48206
aromaticity:0,06697
hydropathy:-0,08753

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM4
[NCBI] 		1048189 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41170.1 [NCBI]
Genbank nucleotide accession
MH512890 [NCBI]
CDS location
range 23712 -> 25013
strand +
CDS
TTGGATACAATATCAGATGCTAACCTATCGGGTGAAGCAATTCTTCCCGTGGTCGTGTCTGATCCATTGATTCCTAACCGAAAAGCAAAAGTAAATCAACTCTTTCGTGGAGTTGCACAAGGAACTAAAGCATCTCCTGGTCTTTGTTTTGATTTAGACAGAGACAGTGGACTATACCAATCAGCGTACGATCAAATCGGTGTTGCATTTGGTGATGGTGGTTTATATTTTAGTAGAGTCAGCAATACTGCAACTAGTTCTTCGCTATTTGTAACTGCTGTTGATGATACTGCTACTAATACGGACATTGTTTTCGCACCGAAAGGAACGGGAACTGTCAAAGTTACGGGTCTATTTACTATTGATGACGGTTCTTTTATCTTAGAAGATGCACAAGGACCTAAGGCAAGATTTGAGGTAAGTAATGTTGGAACGGGAACTAATACTCGTATCTTTACACTACCTGCCATTACATCTGGTAATGGAACAGTCTTGATTGGTGATGATACACAGCAAACACTAAGAAATAAAACCATTCTTATTGACGAGGATAATCTCGTTATTACTGATGGCACTGAAGAAGCAATATTTCAAATTAACTGGGTTGATACATCAAACGCTAGAAGATCATATTTTCTTCCTGATGCGGGAACTGTAACAACTACAGTAGAACCAACTGCAACTGCATCTACATTGTTAGATACAAAGGCAGAACAAACAGCATTGAGTAAGACTCTTGTTAATCTTAAATTAGCAAAAGACGCTGAGGTTGCAACCAACTGGGCACAGTTCAATACTACTGCTCTATCTGCTAATAGAACTCTTACTGTTCCTGATTTATCAGGTATTCTTGCTTTCACTGATGCTACTCAAGTATTACAGAACAAAACTGTTGAAAATTTAATTCTTCAAGATCCAACGGATACTTCAAAGAAGATTACATTTTCAGTTGCTAACTCAAATACTTTTACCAACGTAACTGTTCAAATACCTCCTACTGCAAACCTAAATAGCACAGGAGTTCCTAATACACTTGCTACAGAGGCTGCTACACAGGAGCTGTCAAATAAAACATTGATTAACCCTGTGCTGAAGGGTGCAGGATCACAAACTGTAGGTAGTGTTACTCTTTCTATAGATAATATGACAGCAAACAGAACTATCAGATTCCCTGATTCTGATGCAACTCTGTTATCTACTGAAAACGTTACATTTGATGACGTTACATTTGGTGCAGGTATTAGTGCAGCAAACTTAACTGGTCGAACAAGACAACAACAATTTTTCTACGCAGGATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
524aa9ff2546bb20c2ddce35a4d8a22b6b6cb6c15bac488b3db9507f0b09850e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic island variability facilitates Prochlorococcus-virus coexistence Avrani,S., Wurtzel,O., Sharon,I., Sorek,R. and Lindell,D. 7353 21720364 GenBank