Protein

Genbank accession
YP_008853740.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MNLIPEDGSVTLISGGQAIEPNKLISFSIKNLFDNTKVTANKKANGSTGEIETKSGWYVSSMIPVKVGQTYSKNKPAEIVCYNNNSQYVTSYGNSTDSIKIPNNVAYIRLNILFENYIDFQLEANTVSTSYEKFGVFSNDIRVSSTNFENDSIVGEKLSDGSIDKTKTDFIQESNNLFNLENIEYDILLGLDGSMNSSINYVTSDYIQVDEGETYVTNEKYFGYIIYDKNKHLITGRGQDITGVNVPSGGYYIRLSILNKWLPNFKFYNQKHNAVGSYSIDFKNKPTITETFNEKNRFNKGSYDKNIKERDFEVVEIFKNASDFKAPTGRLIDSFERTYKDNVKSFRMNTLGNTTSEMQIVPVNNIPLKGIQEFNLIVYIEDVSKLTQVQLIANKEGGGSWTRTVKELKNGWNFLRYYSQEGDLSNWTNAILFRIVVYGITGQPTELTICDLKAIRPDKGKIIMVNDHGYSNYKNIAHTKLKALGVPTTFALNPGRLGVPIPGASSILSQEEIDELAVDPYAEFSYHAWDPTQKASKDMTAEELKIEMAKCTHYLKKNALYPDYFWRAAFVQNLAPNHDALNEHMESYACYDESSQFDAFPFKSSYGINRKQIHNIPNASVDTFFDILEKTHCLVVFYTHDISDDGGIHMTNAELDYFVNHVKNGIDNNWLEGTTYARLRHRYKPDYGKKGEFDFYENI
Physico‐chemical
properties
protein length:699 AA
molecular weight: 79499,11330 Da
isoelectric point:5,59576
aromaticity:0,12160
hydropathy:-0,49671

Domains

Domains [InterPro]
G3DSA:3.20.20.370
447–622
G3DSA:3.20.20.370
IPR011330
458–663
IPR011330
YP_008853740.1
1 699
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiRS7
[NCBI] 		1403390 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus saprophyticus
[NCBI] 		29385 Bacteria > Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008853740.1 [NCBI]
Genbank nucleotide accession
NC_022914.1 [NCBI]
CDS location
range 15187 -> 17286
strand +
CDS
GTGAATTTGATTCCAGAAGATGGTTCAGTGACACTAATAAGTGGCGGACAAGCAATAGAACCTAATAAACTAATTTCTTTTTCAATCAAAAACTTATTCGATAACACTAAAGTGACAGCAAATAAAAAAGCTAATGGTTCCACAGGAGAAATAGAAACAAAAAGTGGTTGGTATGTAAGTTCGATGATTCCGGTTAAAGTAGGTCAAACATATTCTAAGAATAAACCGGCAGAGATAGTTTGCTACAACAATAATTCGCAATACGTTACTAGTTATGGAAATAGTACCGACAGCATTAAAATACCTAACAATGTAGCATATATAAGATTAAATATACTATTCGAAAATTATATAGATTTTCAATTGGAAGCAAACACAGTTTCTACTTCTTATGAAAAGTTTGGAGTTTTCTCTAACGATATACGAGTTAGTTCTACCAATTTTGAAAATGACAGTATTGTGGGAGAAAAATTATCGGACGGTTCTATCGATAAAACAAAAACGGACTTCATTCAAGAATCTAATAATCTATTTAATTTAGAAAATATAGAGTACGATATATTGTTAGGGTTGGATGGTTCAATGAATTCCAGCATTAATTATGTAACGAGTGATTATATCCAAGTTGATGAAGGTGAAACCTATGTTACTAATGAAAAGTATTTTGGTTATATAATTTATGATAAAAACAAACATTTGATTACCGGACGAGGTCAAGATATAACAGGTGTTAATGTACCAAGTGGCGGGTATTATATTCGATTAAGTATTTTGAATAAATGGTTACCAAATTTTAAATTCTACAATCAAAAACACAATGCTGTTGGTTCTTATAGTATAGATTTCAAAAATAAGCCGACAATAACGGAAACTTTTAATGAAAAGAATAGATTTAATAAGGGAAGTTACGATAAAAACATCAAAGAGCGTGATTTTGAAGTTGTAGAAATATTCAAAAATGCAAGTGATTTCAAAGCGCCGACTGGTCGATTGATTGATTCATTTGAACGAACGTACAAGGATAATGTCAAATCATTCCGTATGAATACATTAGGGAATACAACTTCGGAAATGCAAATAGTACCGGTTAATAATATACCTTTGAAAGGAATACAAGAATTTAATTTAATAGTTTATATAGAAGACGTATCAAAATTAACTCAAGTACAACTTATTGCGAATAAAGAAGGTGGGGGATCATGGACTAGAACTGTCAAAGAATTAAAAAACGGTTGGAACTTCCTAAGATACTATTCGCAAGAGGGGGATTTGAGCAATTGGACTAACGCTATTTTATTCAGAATTGTAGTTTACGGGATTACTGGACAACCTACTGAGTTGACAATATGCGATTTAAAAGCAATACGCCCAGATAAAGGTAAAATAATAATGGTCAATGACCACGGGTATAGTAATTACAAGAATATAGCACATACTAAATTAAAAGCTTTAGGTGTTCCAACAACATTCGCACTTAATCCCGGTAGATTAGGCGTACCAATTCCCGGCGCTTCTAGTATATTGTCACAAGAAGAAATCGATGAATTAGCGGTCGACCCTTATGCAGAGTTCAGTTATCATGCTTGGGACCCAACGCAAAAAGCATCTAAAGACATGACAGCTGAAGAATTGAAAATAGAAATGGCAAAATGTACACATTATCTTAAAAAGAATGCTCTGTATCCAGACTACTTCTGGCGTGCCGCTTTTGTTCAGAACTTAGCACCTAACCATGATGCTCTAAATGAACACATGGAATCTTATGCTTGTTATGATGAAAGCAGTCAATTCGATGCTTTTCCATTCAAATCCTCGTATGGTATTAATAGAAAACAAATACACAATATACCTAACGCAAGTGTTGATACATTCTTTGATATTTTAGAAAAAACACATTGTCTAGTTGTTTTTTATACTCACGATATATCAGATGATGGTGGTATTCATATGACAAATGCAGAGCTGGATTATTTTGTAAATCATGTAAAAAATGGTATTGATAACAATTGGTTAGAAGGCACAACCTACGCAAGATTAAGACACAGATATAAACCGGATTATGGTAAAAAAGGTGAGTTTGACTTTTACGAGAATATATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f1f2925bec5cf9ac6f6a33d069f2483d60d4ef2791efcfed841464bacce79327
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7534
Evidence 0,7534
Download PDB

Literature

Title Authors Date PMID Source
Complete Genome Sequence of phiRS7, the first sequenced Staphylococcal phage from the marine environment McDole Somera,T.S., Seguritan,V., Hisakawa,N., Miranda,A., Manuel,E. and Segall,A. 2023-06-21 — GenBank