Protein

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Genbank accession
AGC35673.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MKADGSLKSLLQGISQQPVRDRLPGQGTAQINMSADPVKGLSRRPGEDLVNQLGPAGAAKGWGTFQTQDGKQWIVKITASGPQVFDFNGNQATVTVPPGDTYWSTNGQWSVATMKGKTYLANSGVVVEQDSAVSAYPNYTTYTMAVFQILGGNYGKTYTIRINNAVAASFTTPDGSVSSHALQIDTVYIASQLAASLVSNGYNTGGWTTSRVEDIITVRHNVGVITSAIVSDGAGNINAKAMLDSVGDVADLPRFCYHNFAVRVAQEVDPEEDLWLKFVMDNPAGGLGTSGAWYECLAPGLSVGLKNTSMPRCLTYDATTGTFTAAVVDWADRNVGTNTTNPMPSFVGYPITDISMFQSRLIVLAGPNLIASRSKRYEDFFVGSASTLVDSDPLDLTSQAAFASTLKYAIPHNKDLVIFSTKGQFILFGRSAITPSNAALVLTTSFEADLMARPQACGRNVFFATKYGRFAGVREFYTEGGTDINDTRSITQHVNKYMVGSTVHMSATSNYDHLLVHTDNDRKNVYVYQFIWNDQEKIQSAWSKWQFSHEIVYSFFDDELIYLIMQIGTTYYLLRLSLDTVPEGALDYHVHLDARFDVTGVNTAFVLPFDWLADVPLTIVQGDDCPHPGLPVRISSIVYDPGEAGYVVTMREDMMGGDIIVGVNMLSEYQPTMPCAKDSDGVVISNARLVINQFLVSLAGTGEINGQKMTAWGDGPEVSFQGYITNSPGSMTGSPALDDHIFKMPFKAKADEAEVRFYTDSHWPMTILDIEWEGTINKRGKRIPVGN
Physico‐chemical
properties
protein length:787 AA
molecular weight: 85797,62770 Da
isoelectric point:5,06637
aromaticity:0,10165
hydropathy:-0,12160

Domains

Domains [InterPro]
IPR058003
TTP
5–783
IPR058003
AGC35673.1
1 787
Architecture
TTP
TTP 5-783 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGC35673.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,9816
Central domain 132 330 200 0,2069
C-terminal 331 787 456 0,2934
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-330
C-terminal
331-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph03
[NCBI] 		1220603 No lineage information
Host Rhizobium etli
[NCBI] 		29449 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGC35673.1 [NCBI]
Genbank nucleotide accession
JX483875 [NCBI]
CDS location
range 29329 -> 31692
strand +
CDS
ATGAAGGCAGACGGTAGCCTTAAATCACTACTGCAGGGCATTAGCCAGCAGCCTGTTAGAGATAGGTTGCCGGGCCAAGGTACTGCTCAGATTAACATGAGTGCAGACCCTGTTAAGGGCCTGTCTCGTCGTCCCGGTGAGGACCTTGTAAATCAACTTGGTCCAGCCGGTGCAGCTAAGGGCTGGGGAACCTTCCAGACACAAGACGGTAAGCAGTGGATTGTTAAGATTACTGCATCCGGCCCACAAGTATTCGACTTCAATGGAAACCAAGCAACGGTTACTGTACCGCCCGGAGATACATACTGGTCTACGAATGGCCAGTGGTCGGTAGCTACTATGAAGGGTAAGACCTATCTGGCTAACTCTGGTGTAGTTGTAGAACAGGACTCGGCAGTAAGCGCGTATCCTAACTATACTACTTATACCATGGCAGTATTCCAGATACTTGGTGGTAACTACGGTAAGACGTACACCATCCGTATTAATAATGCTGTAGCAGCATCCTTTACCACGCCTGACGGCTCGGTGAGTTCGCATGCTCTGCAGATCGATACAGTGTATATTGCCTCGCAGCTTGCAGCAAGTCTGGTATCTAACGGATATAATACGGGTGGGTGGACTACTAGCCGCGTAGAAGATATCATTACCGTACGACATAACGTAGGCGTTATTACATCTGCAATCGTGTCTGACGGTGCTGGTAATATTAACGCTAAGGCTATGCTGGATAGTGTAGGTGATGTGGCTGATCTGCCGCGTTTCTGCTATCATAACTTTGCAGTACGTGTTGCACAAGAAGTAGACCCGGAAGAGGACCTGTGGCTTAAGTTCGTAATGGATAATCCAGCAGGTGGCTTGGGTACATCTGGCGCTTGGTATGAGTGTCTAGCTCCCGGTTTGTCAGTAGGGCTTAAGAATACGAGCATGCCTCGTTGCTTGACGTATGACGCGACTACAGGAACTTTCACAGCAGCTGTAGTTGATTGGGCAGATCGTAACGTTGGTACTAACACCACTAACCCGATGCCTAGCTTTGTAGGATATCCTATCACAGATATCAGCATGTTCCAGTCTAGGCTTATCGTCTTGGCAGGACCTAATCTGATTGCATCTAGGAGTAAGCGCTATGAAGACTTCTTCGTGGGGTCAGCTAGTACCCTTGTGGATAGTGATCCTCTGGATCTTACCAGTCAAGCTGCCTTTGCTAGCACTCTCAAGTATGCTATTCCTCATAACAAAGACTTGGTTATCTTTAGTACGAAGGGCCAGTTTATTCTGTTCGGTAGGTCGGCAATTACTCCGTCGAATGCTGCACTAGTTCTAACTACCAGCTTCGAAGCTGACTTGATGGCTAGGCCGCAGGCATGTGGACGTAACGTATTCTTTGCTACCAAGTATGGTCGCTTTGCAGGTGTACGTGAGTTCTACACTGAGGGTGGTACGGATATTAACGACACACGATCGATTACTCAGCATGTCAATAAGTACATGGTTGGCAGCACGGTCCATATGTCAGCAACGTCTAACTATGACCACCTGCTAGTTCACACAGATAACGATCGTAAGAATGTGTATGTATACCAGTTCATCTGGAACGATCAGGAGAAGATACAGTCTGCATGGTCCAAGTGGCAGTTTAGTCATGAGATAGTGTATTCGTTCTTTGATGACGAACTAATTTATCTGATCATGCAGATCGGTACTACGTACTACTTGTTGAGACTGTCCCTTGATACTGTGCCGGAAGGTGCGCTGGATTACCATGTCCACCTAGACGCTCGCTTCGATGTGACCGGAGTTAATACAGCATTCGTGCTTCCGTTCGACTGGCTTGCAGACGTACCCTTGACTATCGTACAGGGTGACGATTGCCCACATCCCGGACTACCAGTGCGCATTAGCAGCATTGTGTATGATCCCGGTGAAGCTGGTTACGTTGTCACTATGCGAGAGGATATGATGGGCGGGGATATTATCGTTGGCGTTAATATGCTTAGCGAGTACCAGCCTACTATGCCTTGTGCTAAAGATAGTGATGGTGTTGTTATCAGCAACGCTCGACTGGTTATTAATCAGTTCCTCGTGTCGCTTGCAGGTACAGGTGAGATCAATGGGCAGAAGATGACTGCATGGGGAGACGGGCCAGAGGTATCCTTCCAAGGATACATTACTAATAGTCCCGGCTCTATGACAGGCAGTCCTGCACTAGATGACCACATATTCAAGATGCCATTCAAAGCTAAGGCTGATGAGGCAGAAGTACGTTTCTATACAGATAGCCATTGGCCTATGACCATTCTGGATATCGAGTGGGAAGGAACCATTAACAAGCGCGGTAAGCGCATCCCTGTAGGAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7bc2301d4b4048749d6c426809bccc8d1f2ee5ed6e7d76b93e6025df427c4140
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9233
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50