Protein

View in Explore
Genbank accession
QGJ87102.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLEDGTTKMDSRTIHPMEIIVEVFCPSIGVVDQINQLLLDRDTLYKVITRGMVFERMMCTSEALNQTPDVISATPARLTFSQVLVQNPKPIMFRNAGDSSMIDRGLALAEDVVGSAGDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:134 AA
molecular weight: 14728,78470 Da
isoelectric point:4,39726
aromaticity:0,05970
hydropathy:0,12090

Domains

Domains [InterPro]
DC_0601
STR
1–133
DC_0601
IPR054442
ATT
11–87
IPR054442
QGJ87102.1
1 134
Architecture
STR
ATT
STR
STR 1-10 | ATT 11-87 | STR 88-133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_SMS29
[NCBI] 		2664212 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PA8P1 >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGJ87102.1 [NCBI]
Genbank nucleotide accession
MN615702.1 [NCBI]
CDS location
range 23038 -> 23442
strand +
CDS
ATGCTGGAAGATGGTACGACCAAGATGGATTCCAGAACGATCCACCCTATGGAAATCATCGTCGAAGTATTTTGCCCTTCAATTGGTGTCGTCGATCAGATCAATCAATTGCTCCTGGATCGCGACACACTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGGATGATGTGTACCAGCGAAGCGCTCAATCAGACTCCGGATGTGATATCGGCGACTCCTGCACGGCTGACATTCTCCCAAGTTCTCGTCCAGAATCCCAAGCCTATAATGTTCCGAAATGCAGGGGACTCTTCTATGATCGACCGAGGGCTGGCCCTAGCTGAAGACGTGGTTGGCTCGGCCGGCGATCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ba679887fb97ec2c4a538477b0e222c27df44856aa3329cc981e1325570f370
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudomonas aeruginosa phages alone and in cocktail formulations: impact on cell killing and survival Sillankorva,S. 2021-07-19 — GenBank