Protein

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Genbank accession
YP_010738926.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MATIVVPQRFAQRRDTSANWNSKDPVLWNGEIGFLLDPGQAVKLKVGDGTKKWSELDFFASDGKPVQLRAADGYIQWNYVGDTSWINLVSLDNLRGADGDDGADGKSAYEIAVDGGFVGTIPDWLASLKGEPGDKGDKGDPGNPGTPYARRIQHVADTDAGTFECDWGQYDEIRISLTATVVLSFTGAIDGQGCVLKLRQPPAGGCQVGLPSGVVRFNSLIQAYAVTQTGSRADKVGFVYDGEDARYDLVSIVPGI
Physico‐chemical
properties
protein length:256 AA
molecular weight: 27391,17950 Da
isoelectric point:4,59165
aromaticity:0,09375
hydropathy:-0,27695

Domains

Domains [InterPro]
DC_1473
STR
1–255
DC_1473
SSF69349
STR
9–130
SSF69349
IPR041352
ATT
13–50
IPR041352
YP_010738926.1
1 256
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-50 | STR 51-255 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010738926.1
1 256
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,6907
Central domain 227 245 20 0,0017
C-terminal 246 256 10 0,9953
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-245
C-terminal
246-256

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xp12
[NCBI] 		2746072 Uroviricota > Caudoviricetes > Mesyanzhinovviridae > Bosavirus > Bosavirus Xp12
Host Xanthomonas oryzae
[NCBI] 		347 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010738926.1 [NCBI]
Genbank nucleotide accession
NC_073033.1 [NCBI]
CDS location
range 35707 -> 36477
strand +
CDS
ATGGCAACCATCGTAGTACCCCAGCGATTTGCCCAGCGCCGTGACACGTCGGCGAACTGGAACAGCAAGGACCCGGTCCTCTGGAACGGCGAGATCGGCTTCCTGCTGGACCCCGGCCAGGCCGTCAAGCTGAAGGTCGGCGACGGCACCAAGAAGTGGAGCGAGCTCGACTTCTTCGCCTCCGACGGCAAGCCGGTGCAGCTGCGGGCGGCCGACGGGTACATCCAGTGGAACTACGTCGGGGACACGTCCTGGATCAACCTGGTCTCCCTGGACAACCTGCGCGGCGCGGACGGCGACGACGGGGCCGACGGCAAGAGCGCCTACGAGATCGCCGTCGACGGCGGCTTCGTAGGCACGATCCCGGACTGGCTGGCCTCGCTGAAGGGCGAGCCCGGCGACAAGGGCGACAAGGGCGACCCCGGCAACCCCGGCACGCCGTACGCCCGCCGCATCCAGCACGTGGCCGACACCGACGCAGGCACCTTCGAGTGCGACTGGGGCCAGTACGACGAGATCCGGATCTCCCTCACGGCCACGGTGGTGCTGAGCTTCACCGGGGCCATCGACGGCCAGGGCTGCGTCTTGAAGCTGCGCCAGCCGCCGGCGGGAGGGTGCCAGGTCGGGCTGCCCTCCGGCGTGGTCCGGTTCAACTCCCTGATCCAGGCGTACGCCGTGACCCAGACCGGGTCGCGCGCGGACAAGGTTGGTTTCGTCTACGACGGTGAAGACGCACGATACGACCTGGTCTCCATCGTTCCCGGGATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
91029007d1073cb98970a0bfc706851a01a1abc118c6ba46a1615727787fbe64
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8953
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50