Protein

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Genbank accession
QEM42585.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSRELMPKSGIMMPHVVVTRDAAVVGVSTVDGQAGAIDLTGKYLQKTDAAATYQTKVEGASKDFVLDSIQPIMSGALFREDPWVVNDTPFRSTGANGVESVDMMKVTTDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIEDLPFAAIGSYVKDSKGRTIGVNRTGINSDIKQLTQKVTFTQPVTVADAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVTSDGQLLNRADYPDLWAYAQLLSPIEDSLWLSNIYQRGRYSTGDGTTTFRVPDRNGIQPNSLSALYGRGDGGASAANGQVFDSAAPDIIGSVAAYSAGTYAQVFGLATNAFESNNALFPEGSGDTIPPGSGPVTGRNNTLEFKASRYNGIYGRSNTEIMGRNFVGVWTIRANGGFVAANTSWSVINSDSAAPALNTSVVGGKVESKYTNPTSSQYARMYISSSWGSVCSAVIEAQGASTHAYKFYEDGTVDFRQSGKTNPFRMYTPTGTWTGLTDAGSNNLTTNGMDRVAISSGSDTVVRGYSIGGSKPNGYPTKVGYHMYLPGSNAFGIACTTIGGDNGKFCRYFYDIDGQMYGSTDYGNFSYTKSGVSDENLKHNIVDIDAERAIEVIKGLKFKSFVYNDDERNRSRRGIIAQQAETVEPLYVKTRKYPGMEKGSPEIEQKELDTTPMLLDTMQVVQDLLKRIEILESKLAEK
Physico‐chemical
properties
protein length:730 AA
molecular weight: 78741,72810 Da
isoelectric point:5,55240
aromaticity:0,09315
hydropathy:-0,36890

Domains

Domains [InterPro]
DC_1514
STR
20–315
DC_1514 DC_1985
IPR030392
CHP
625–677
IPR030392
IPR030392
CHP
625–727
IPR030392
QEM42585.1
1 730
Architecture
STR
RBD
STR 20-315 | RBD 427-730
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEM42585.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 125 125 0,5632
Central domain 126 324 200 0,2168
C-terminal 325 730 405 0,9157
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-125
Central
126-324
C-terminal
325-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SGF2
[NCBI] 		2601630 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus SGF2
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
868a3c6637732b5bc57bc9460a3e681e872e402a669f817094d2d0205c83add8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5886
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50