Protein

View in Explore
Genbank accession
XNO99937.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGFNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSEWTDYARGMSSTDVNIITDAILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRVMRKENGKRKAEIAHTTVLIANESEARAAEITQLKAQIDDDITAQITTLNQALATESETRATQIGQLQADFAADIDGVKTTMNAGFTQVNQAIANESDARASSEAALDAKIGQNSAALNQKLDSWANVNGVGSMYTMKLGLKYNGQEYNSGMALQLTTRGSSVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNFQENVAGWRLDKNGVFVNYGSISGEGSIKQTNQNITVRDGSGRVRCQLGRITGAW
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126703,44670 Da
isoelectric point:4,79621
aromaticity:0,09059
hydropathy:-0,28911

Domains

Domains [InterPro]
DC_0014
STR
1–1148
DC_0014
IPR053171
Unmapped
3–875
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–716
IPR036116
XNO99937.1
1 1148
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1148
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO99937.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,8800
Central domain 502 1009 509 0,0645
C-terminal 1010 1148 138 0,3675
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-1009
C-terminal
1010-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth84
[NCBI] 		3384146 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO99937.1 [NCBI]
Genbank nucleotide accession
PQ657826.1 [NCBI]
CDS location
range 24634 -> 28080
strand +
CDS
ATGAATAATATCAAGGCCCGTAAGGGTGGCTCCAGCAAGCCGCGAACCCCGGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTGTTGCTTGCTGTTTCAGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTTATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATCCAGGGGTTCAGCGAATCAAGCGCTGAATTCCAGGTTGCTCGTGAAGTCACTCATAACACGCCTTATACGCTTACCGTATCGAACAAGAATCTTTCTGCCATTCGCTTTCGCCTGTTATGGCCCCGCGTGCTGACTCAAAAAGATAATGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGACGGCGCAAGTTATCAGACTTACCTAACTGGCAAGATTGACGGCAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTTCTTATCCGCGTGAGCCGAGTAACGCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGCAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTCAAGTGGGCGTGGAGCAATAACCCGGCCTGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGCTTAGACCAGCGCGAACTTGGCATCCCGGTTGACAAGTGGTCGCTGTACGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTAGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTTTCGATTATCGTCGACAAGCCGCGCGATCCGGTGTACCTGTTTACGGCTGATAACGTCGTTGATGGCGTGTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTATACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATGTTGAACCAGTATTCAACCCGGACGCAGCCATGCGGTTCGGCCACAACCCAACGAGCATTACAGCGATCGGGTGTACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCTACAACCGTTTCGTTTTCGACTGGCCTGGAAGGCATGATTCCTTCTTGCGGCGATGTAATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTTTCAGGGCGAATCATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACTGACGACGGAAAGCCAGTGCGCCGCACAATCGCCAGCGTTTCGGCGGACGGTAAAACCCTAACGCTAAACGTGGGATTTAATTTTGACGTTGCGCCGGACAGTGTATTCCTGATCGAGAGCGACCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGACGAATTCACCTTCGCCATCACAGCTACGCAGTACAACCCGAACAAGTATGACGCGATCGACAACGGAGTAATTACCGACGACCGACCAACTTCGGTTGTTGACCCGGATTCAATGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGAATGAGCGTCGAGACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGCAAAGATGGCGGTAACTGGAACAACGTTCCTCGCACTGCGACAACGCAGGTTGATATTGAAGGCATCTATGCTGGCGAGTATCAGGCCCGCGTTAGGTGCATTAGCGGCGGAAATGTAGCGTCTCCGTGGTCTGCATTGGCAACCGCCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACAATGAGATCTTCGGCATTCGCGTTAAGTGGGCCATGCCAGAAGGGGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGACGCAAGCCTGCTTACACTGATTCCTTACCCGGCGGCTGAATACTGGCATTCAATTTTGCCCGCTGGCTACGTGAACTTCTACAAAGCCAGAAGCGTAGACCGGATCGGCAACGTTTCAGAATGGACTGATTACGCTCGCGGTATGTCTTCGACTGACGTTAACATCATCACAGATGCGATCCTGGATGAAATCCTGGATAGCGACGCGATGAAGGAGCTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCGAACAGCATCATTCAAAACGCTTTGGCGAATGATGCGGACGTCAGGGTTATGCGCAAGGAGAACGGTAAGCGCAAGGCTGAGATCGCGCATACTACCGTGCTGATTGCGAATGAGTCTGAGGCGCGGGCGGCTGAAATTACGCAGCTTAAAGCGCAGATTGATGACGATATCACGGCGCAGATCACGACGCTCAATCAAGCCCTGGCGACGGAAAGCGAGACGAGAGCAACGCAGATCGGTCAGTTGCAGGCAGATTTTGCGGCTGATATTGACGGCGTAAAAACAACCATGAACGCTGGTTTTACGCAGGTTAATCAGGCTATTGCAAATGAAAGCGACGCGCGGGCAAGTTCAGAGGCGGCACTAGATGCCAAAATCGGGCAGAACTCCGCAGCGCTAAACCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTCGGTTCCATGTACACGATGAAGTTAGGCTTGAAGTACAACGGTCAGGAATATAATTCCGGGATGGCGCTACAGCTTACAACGCGTGGTAGTAGTGTTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGTAATGCGGCGTCGGGCGCGTACACGTTGCCGTTCGTTGTACAGAATGACCAGGTGTTCATGAATAACGCGCTTATTCAGGACGGTTCGATTACCAACGCGAAGATCGGTAACGTCATTCAGTCCAACAACTTTCAGGAGAATGTTGCAGGATGGAGGCTTGATAAAAACGGCGTATTTGTCAACTATGGTTCAATATCTGGCGAAGGTTCCATCAAGCAAACTAACCAGAACATCACGGTTCGAGATGGTAGCGGCCGCGTTCGTTGCCAGTTGGGTAGGATCACTGGCGCATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6d587469033265255aa29b0afd91d7f3382d7a37dbe6e849e4986eec3860ffd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank