Protein

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Genbank accession
QQG33492.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MGQKRSANDALRAAQLNELRYDATTGVVIGIDGMLGPRGKTGLSGTPGPMGVCTELYVLSYAGLAFKVRLKPETFAMIEDATQLNGDELSFIKVVDESEWKSIREAWAEEWNKRRAYRAFDLGEMMPDE
Physico‐chemical
properties
protein length:129 AA
molecular weight: 14321,13740 Da
isoelectric point:4,97116
aromaticity:0,08527
hydropathy:-0,36512

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PcCB7V
[NCBI] 		2798043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG33492.1 [NCBI]
Genbank nucleotide accession
MW367417.1 [NCBI]
CDS location
range 97973 -> 98362
strand -
CDS
ATGGGCCAAAAGCGAAGCGCTAATGATGCACTGAGGGCGGCGCAGTTGAACGAACTGCGTTACGACGCAACTACCGGGGTTGTGATAGGGATAGATGGGATGTTGGGACCAAGAGGGAAGACAGGGTTGTCCGGGACACCGGGGCCTATGGGTGTCTGCACAGAGCTTTATGTTTTATCGTATGCGGGGCTTGCCTTTAAGGTCCGGTTGAAACCAGAAACCTTTGCCATGATTGAGGATGCTACCCAATTGAACGGGGACGAACTTTCTTTTATCAAGGTGGTGGATGAGTCCGAGTGGAAATCGATCCGGGAGGCTTGGGCGGAAGAGTGGAACAAACGCCGGGCGTACCGAGCTTTTGATTTAGGGGAGATGATGCCGGATGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3969e972dd3a50aba6501aa514b4881041a93dda69c19cc3b0f681a5da7d65c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of novel berlinvirus and novel certrevirus lytic for Pectobacterium car. car Petrzik,K., Kmoch,P., Vacek,J. and Brazdova,S. 2021-04-29 — GenBank