Protein

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Genbank accession
ANB40494.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKLLAIISHSSESVLIFHSSERTLIKHSSESKAKRFRYLIKNRFNYEAVFLFNFVKNKFIMCNENINNIASFDFSQIVDEINWFNNSSNPILTENNKLVLRPDTTISMFSRGLGSIDITNNRLRYKLNFEIFRPTTTGVDTVNFIIQIWNGFNLIGESTVYVDNISVGQIVKYSLDRTYEYDQLTGNVSIKIKTPQGYQNEIRLTKLDVWDFNFCEENVRTYFVFDEFFQNAITAQSAGLRLLKYKVDDVETLTPAFFAHNTVNLGGNPIAQWKYATAEIDGGNRIAATSNQNTFNPFVDEFGLIFDTINSFHGEKPIGTIGSQNFGSGIMNIGFEKPEIYNGLLQRKKGAFFIDIDYTKNLFIECDVVVNQTSSQLFTNPTSFRKYFIIWDAEKCQKQFYFINQIGQNQQPQDQLTNGFLTGITPETKEDTSIPCNGSLNFNGAAGSYSFEINFGTDIGMAGIAYNASHIPDKFEISWNGQTVSTGYVGCNEYNQDLINAGVPMSQINTTPHPGNGAGQLLFNKNSAYPTNAIVTVTGVIGNTGWNISGICPFISNFTEISWNDTNTTEDRTGNDTNETIYNGGVFFPVTNEVWQKNINGAGWVDDSQVVNVTGTFNLVAGINEFRLKAMVGSNAVYSNKLKYTRSNITEPQSGGISFPIHNATELNICIARLSDGGSPITECGVIYNQNTPPTLLDNKIIYDNNLSNECKIFTRPIAGVLYYFTVYYTNSVGTSFIDYPNKI
Physico‐chemical
properties
protein length:745 AA
molecular weight: 83518,55350 Da
isoelectric point:5,17504
aromaticity:0,12617
hydropathy:-0,24711

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANB40494.1
1 745
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,9196
Central domain 31 403 374 0,7120
C-terminal 404 745 341 0,2454
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-403
C-terminal
404-745

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage Fpv5
[NCBI] 		1814285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANB40494.1 [NCBI]
Genbank nucleotide accession
KU599880.1 [NCBI]
CDS location
range 14499 -> 16736
strand +
CDS
TTGTCAAAATTATTGGCCATCATATCGCATTCTTCGGAAAGCGTCCTAATATTTCATTCTTCGGAAAGAACTTTAATAAAGCATTCTTCGGAAAGCAAGGCAAAAAGATTTCGCTATCTTATAAAAAACCGTTTCAATTATGAAGCGGTTTTTTTATTTAACTTTGTCAAAAATAAATTTATTATGTGTAACGAAAATATAAACAATATTGCATCATTCGATTTTTCGCAAATTGTTGATGAAATAAATTGGTTCAACAATTCATCGAATCCAATTTTAACAGAAAACAACAAACTTGTTTTGAGACCCGACACAACAATTTCAATGTTTAGTCGTGGACTTGGTTCAATTGACATCACAAACAATCGTTTACGATATAAATTGAATTTTGAGATTTTCAGACCAACAACAACGGGTGTTGATACTGTAAATTTTATTATTCAAATATGGAACGGTTTTAATTTAATCGGCGAATCAACCGTTTATGTTGATAATATTTCAGTCGGTCAAATTGTGAAATATAGTTTGGATCGAACGTATGAATATGACCAATTGACCGGAAATGTTTCAATAAAAATCAAAACGCCGCAAGGTTATCAAAACGAAATTCGATTGACAAAACTTGATGTTTGGGATTTTAATTTTTGTGAAGAAAACGTGCGAACGTATTTTGTTTTTGATGAATTTTTTCAAAATGCAATCACGGCACAAAGCGCCGGATTAAGATTGTTGAAATATAAAGTTGATGATGTTGAAACATTGACACCGGCATTTTTCGCACACAACACGGTTAATTTGGGCGGAAATCCAATTGCACAATGGAAATATGCAACGGCGGAAATTGACGGCGGAAATCGTATTGCAGCAACTTCAAATCAAAATACATTCAATCCATTTGTTGATGAATTTGGTTTGATATTTGACACGATTAATTCATTTCACGGCGAAAAACCAATTGGCACAATCGGAAGTCAAAATTTTGGTTCCGGAATAATGAACATCGGTTTTGAGAAACCAGAAATATACAATGGACTTTTGCAAAGAAAAAAAGGCGCTTTTTTTATTGATATTGATTATACAAAAAATTTATTCATCGAATGTGATGTTGTTGTTAATCAAACAAGTTCACAACTTTTCACAAATCCAACTTCATTTCGTAAATATTTCATTATTTGGGACGCCGAAAAATGTCAAAAACAATTTTATTTCATCAATCAAATTGGTCAAAATCAACAACCGCAAGATCAATTGACAAACGGTTTTTTAACTGGAATAACACCAGAAACAAAAGAAGACACATCAATTCCTTGCAACGGTTCATTAAATTTCAACGGTGCGGCTGGTTCGTATTCATTTGAAATAAATTTTGGCACGGATATTGGAATGGCCGGCATTGCATACAATGCTTCGCATATTCCGGACAAATTTGAAATATCGTGGAATGGTCAAACGGTTTCAACTGGTTATGTTGGTTGTAATGAATACAATCAAGATTTAATTAATGCGGGTGTTCCGATGTCTCAGATAAATACAACGCCACATCCTGGAAACGGTGCCGGACAATTATTGTTCAATAAAAATTCGGCATATCCAACAAATGCGATTGTTACAGTTACGGGCGTGATTGGAAACACTGGTTGGAATATTTCTGGAATATGTCCGTTTATTTCAAATTTTACAGAAATATCTTGGAACGACACTAACACAACAGAAGATAGAACCGGAAACGATACGAATGAAACAATTTACAATGGCGGTGTTTTCTTTCCTGTAACAAATGAAGTTTGGCAAAAAAACATCAACGGAGCTGGTTGGGTTGATGATTCGCAAGTTGTAAATGTAACCGGCACGTTTAACTTGGTTGCGGGTATAAATGAATTTAGATTGAAAGCAATGGTTGGTAGTAACGCCGTATATTCAAATAAACTAAAATATACACGAAGTAATATTACAGAACCACAATCCGGCGGAATAAGTTTCCCGATACACAATGCGACTGAATTAAATATTTGTATTGCACGTTTGAGTGATGGCGGAAGTCCTATAACAGAATGCGGCGTAATATACAATCAAAACACACCTCCAACGCTTTTAGATAATAAAATTATTTATGACAATAATTTGTCAAATGAGTGCAAAATATTTACAAGGCCAATTGCAGGTGTTTTATATTATTTTACTGTATACTATACTAATTCCGTAGGCACTTCTTTCATTGATTATCCAAATAAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0cbc648d30088a4fb4bb240f981ff559fe8bdcb1417026ce1b37d9b9a666084
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5533
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular aspects and genomic diversity of bacteriophages-specific to fish pathogen Flavobacterium psychrophilum Castillo,D. and Middelboe,M. 2016-12 — GenBank