Protein

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Genbank accession
YP_009224674.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFDGAIKSLMQGVSQQVPRERLDGQVSVQLNRLSDVVNGNRRRPGARYLADVPTPTQYDDRVFASYVDVQDTANHVIINTETGQLLILSEDFTTTLHSSTQAYLVASAASAIQTASLRGYLYLANTEKAPAKVYGSTAQQDPSKTGFYFVRTPAFQKDYDITLSNSTGTYTYTYRTPTGTGSGDADLAKPSYIISDLLAKINAQTGTHGITATAYDAYMFLSSNTVSLSVTTNAGSTYATGSNQSRVNVVSDLPARLPAVGNGALVAVGTTERNFVWYQYDSATSVWKEAGAYGSPTGFSNMPIRISLGGVYTVETPAYEGRLAGSDETNEDPGFIDNGVTGFGAYQGRLVILAGPEVCMSAAGNPLRWYRSTVTALLTDDPINIFSGAATSTNFRHCVQFNKDLLLFARSCQAVVPSSNAAITPQTAQIVITSGYTTDTLAQPGVVGRSVLYSMPRTEHFAGVLEIIPSNTTDSQYTSNDITAHIPRYLPGRIRSIVSSTTSNSSAFICTGDSRSLFIQDYLWSGDEKVQSAWHQWTLPYPIVCTWFVRDRVYIGMRDGTTILVVTIEPQAGNTIDSYVRPFSDVYLRVTITDRQFALPTRLRAAVGSGEGLFITFADTSMGGMWVGYESIDPTTYVVTTVRNVPDGEYFVGLRYTSVLSPTPPLVRDANGIVIGTYQSLLVRYELTLKDSGEFHAIITDSSRTLTDGNYSSLVYSSTELLPNNPTDASLGRTIIPVRAQAQDTVATFEANADTDLCILDIEYVLQYRARRKRI
Physico‐chemical
properties
protein length:776 AA
molecular weight: 84405,38460 Da
isoelectric point:5,29730
aromaticity:0,09794
hydropathy:-0,12977

Domains

Domains [InterPro]
DC_0058
STR
1–776
DC_0058
IPR058003
TTP
5–776
IPR058003
YP_009224674.1
1 776
Architecture
STR
STR 1-776
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009224674.1
1 776
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9852
Central domain 141 339 200 0,2683
C-terminal 340 776 436 0,1280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-776

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Peat1
[NCBI] 		1654601 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Phimunavirus
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009224674.1 [NCBI]
Genbank nucleotide accession
NC_029081 [NCBI]
CDS location
range 25658 -> 27988
strand +
CDS
ATGGCCTTTGATGGCGCGATAAAGAGTTTGATGCAGGGCGTGAGCCAGCAGGTACCCCGCGAGCGCCTAGATGGTCAGGTATCAGTACAGTTGAACCGTTTATCCGATGTGGTGAACGGGAACCGTAGACGCCCCGGCGCACGGTACTTAGCAGATGTACCTACACCAACGCAGTACGATGACCGTGTATTCGCCTCGTACGTAGACGTGCAGGACACAGCCAATCACGTTATTATTAATACAGAGACGGGTCAGTTATTAATTCTATCCGAAGACTTTACTACCACTCTACATAGTAGCACACAGGCGTACCTAGTGGCCTCTGCTGCTTCTGCTATACAGACAGCCTCACTAAGAGGTTACCTGTACCTTGCAAACACTGAGAAGGCTCCTGCGAAGGTTTATGGTAGTACTGCGCAGCAAGACCCCTCTAAGACGGGCTTCTACTTTGTACGTACACCTGCATTCCAGAAAGATTATGATATTACGCTTTCTAATAGTACTGGAACTTACACGTACACGTACCGCACACCGACAGGTACCGGTTCGGGTGATGCAGACTTAGCCAAGCCTTCTTATATTATCAGCGATTTGCTGGCTAAGATTAATGCACAGACTGGTACACACGGGATTACAGCTACAGCATATGATGCGTACATGTTCCTGAGTAGTAACACTGTCTCTTTATCTGTAACCACTAATGCTGGGAGTACTTACGCTACGGGTAGTAACCAGTCGCGTGTGAATGTAGTATCTGACCTCCCTGCGCGTTTACCCGCTGTGGGTAATGGTGCGTTGGTAGCGGTCGGTACAACCGAGCGTAATTTTGTGTGGTACCAGTATGATTCCGCTACCTCCGTATGGAAAGAAGCCGGTGCGTACGGAAGCCCTACAGGTTTCTCCAATATGCCTATTCGTATCTCATTGGGTGGTGTCTACACAGTAGAAACCCCAGCTTACGAGGGCCGCCTAGCAGGCTCTGATGAGACTAACGAGGACCCCGGCTTTATTGATAATGGGGTAACTGGTTTCGGTGCGTACCAAGGCCGCTTAGTGATTCTAGCGGGGCCAGAAGTATGTATGAGCGCAGCAGGTAACCCATTACGTTGGTACCGCAGTACAGTAACCGCGTTGTTAACTGACGACCCTATCAATATCTTTTCAGGTGCTGCTACTAGTACTAACTTCCGACACTGCGTACAGTTCAACAAGGACTTACTCCTGTTTGCGCGCTCCTGTCAGGCTGTAGTACCCAGTAGTAATGCGGCTATTACTCCACAGACTGCCCAGATAGTAATCACGTCGGGTTATACTACCGATACTCTGGCACAGCCGGGTGTGGTGGGGCGTTCTGTACTGTACAGTATGCCGCGTACTGAACACTTTGCGGGTGTATTGGAGATTATTCCAAGCAACACCACAGACTCTCAGTACACCTCGAATGATATTACCGCCCATATCCCAAGGTACTTGCCGGGGCGCATCCGTAGTATTGTATCTAGTACCACTAGCAACTCCAGTGCATTCATTTGTACAGGGGATAGTCGTAGCCTGTTCATTCAGGACTACCTGTGGTCTGGTGATGAGAAGGTACAAAGTGCATGGCACCAGTGGACTTTACCATACCCTATTGTGTGTACATGGTTCGTTCGTGACCGTGTGTACATCGGTATGCGGGATGGTACCACTATCCTAGTGGTAACGATTGAACCACAGGCGGGTAACACGATAGACAGCTATGTACGTCCGTTCTCTGATGTGTACCTACGGGTCACTATCACCGATAGGCAGTTCGCCCTACCTACCCGTTTACGCGCCGCAGTGGGTAGCGGAGAAGGTCTGTTCATTACCTTTGCTGATACCAGTATGGGTGGAATGTGGGTGGGGTACGAGAGTATCGACCCAACGACGTACGTAGTAACTACAGTACGTAATGTTCCCGATGGTGAGTACTTCGTAGGGTTAAGATACACTAGTGTACTCAGTCCAACACCACCATTAGTACGAGATGCTAACGGTATTGTTATTGGAACATACCAATCATTACTGGTGCGGTACGAGCTTACGCTGAAAGATTCAGGAGAGTTCCACGCTATTATTACCGATAGTTCTCGTACCTTAACGGATGGTAACTACTCCAGCCTAGTGTACAGTAGCACTGAGTTACTACCAAACAATCCAACCGATGCTTCACTAGGTAGGACTATTATACCGGTACGTGCTCAAGCGCAGGATACTGTGGCTACCTTTGAAGCTAATGCTGATACCGACTTATGTATCTTAGATATTGAGTACGTCCTGCAATACAGGGCACGGAGGAAAAGAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
57bf35cee6b25b681b037aa151bee9e70cdf29852d8c7c93df7a9fac247dec58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50