Protein

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Genbank accession
AEV52166.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKLMALGQRVFEVRVGTGSSAVLADQVIVGTGSSAVIAWQRLRSISQSKGRVTVPQSSWTTLLASTVTGSGTGNFKGVYSWGTDVLQSLSFTRSVRLLVNGTQVAYQTGSFSNNGWSVTLETGPYRFYDGDVVEVQAYTTGTNRTSARNVDSSSLSVNLV
Physico‐chemical
properties
protein length:161 AA
molecular weight: 17142,94840 Da
isoelectric point:9,97972
aromaticity:0,08696
hydropathy:-0,02050

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage RER2
[NCBI] 		1109715 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodococcus erythropolis
[NCBI] 		1833 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEV52166.1 [NCBI]
Genbank nucleotide accession
JN116827.1 [NCBI]
CDS location
range 18485 -> 18970
strand +
CDS
ATGAGCAAGCTCATGGCACTCGGCCAGCGTGTTTTCGAGGTCAGGGTGGGCACCGGTTCTAGTGCTGTACTAGCCGATCAGGTGATCGTAGGGACCGGTTCCAGTGCTGTGATCGCCTGGCAGCGACTCAGGTCCATCTCGCAGTCCAAGGGTCGAGTCACTGTCCCGCAGTCGTCGTGGACCACGCTCCTGGCATCCACGGTGACCGGTAGCGGCACCGGCAACTTCAAGGGGGTCTACTCCTGGGGTACCGACGTGTTGCAGTCCCTGTCGTTCACACGCTCTGTTCGTCTGCTCGTGAACGGAACCCAGGTGGCTTACCAGACTGGCTCGTTCTCCAACAACGGCTGGTCGGTCACTCTGGAGACCGGCCCGTACCGGTTCTATGACGGCGATGTGGTGGAGGTCCAGGCTTACACCACTGGCACCAACCGTACGTCGGCTCGAAACGTGGACTCGTCCTCGCTGAGCGTTAACCTGGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
05bac0277416fb26ac8c3e52802f9080c17c107782b93e509a37df5bb2954de4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5284
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence and characterization of the Rhodococcus bacteriophages REQ1, RGL3 and RER2 Petrovski,S. 2012-11-06 — GenBank