Protein

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UniProt accession
H6WXP6 [UniProt]
Protein name
Tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNILDSAKKYIEETEEINLAHLISLELPGSSGVFIYLTDYFRDITYKGQVYKSGVIKRVGDVKQTKELTIYRVPVQVSGAIDEEIDRVLNSKSFLNRKLKIDRVFLDEDGEIIQIYADGSTITYFEGVIVSSALDESNTNKGKGRSVITWNCASKLYALDAINGRLTDDASHRGLINVNGIMQPSSSAKKPEYQLDKGFFHANKSVKLLAEYQTKEKRYRLKKRRAGGFRGLMGQKHYDMEEYWANVVKEVDMDINLTAKYLPVVYGVQKVAGIPIFFDTDINNPEEIWAVYAFCEGEIDGFLDIFFGDNPMICISENDQSKRACVGMKRNNGDTIGALAPASGRTVPSKHGEHYVYDDGNGPIDFWTFHGSVTQDAAKVLVDKASAGSFKLQNDGNYGAEYWDDSFKLTDTAYLVVKFELNENRTSIPEVSAEIQGKKIPVYHEDGTVTADRTSLNLAWQTLDYLRSTTYGAGLTLDEIDLASVRECAKYMDAVDTSYDPDWVPYWRYLGWEDYTAENRQILQGSAILSTSDTVFKNVQSLIAQYDASLNIVSGKYTLTMEADKPVVYDINEGDIIDGSIKVSDNSMENKYNSIQASIIDPANAWGSNTITFFNKDYKIEDNGKDRKANVTFPFITNYYTARTRAEYYLRKSRYNRTVSFSLPFTFLWLYPNANITLSVKRYGWDKKHFLIQDMTWKANGHIMVTAREYAPDVFINSTQTDNSDDQIPDVVVSVLPPRDLQYDPKLGEPEVGLNGTLSWLPSLTKRVSYYTIKYTGLVDLITVPVSGTAPLNSRVTLPLYNLAEGEYTFEVRAVSPDGDTSLPAKLVVNVNPSAILPKIENLRLINRTDTSAKVFIGKDVELMWDELLEGASVSGFRYRLRFLDGDTGEVLRDTTTTSTSFIYTYDMNKEDYKRTHGTLGICRNIIIYIRGEADNNITSIDWTIL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106801,93320 Da
isoelectric point:5,11621
aromaticity:0,10982
hydropathy:-0,35797

Domains

Domains [InterPro]
DC_0187
STR
241–941
DC_0187
IPR032876
ATT
539–681
IPR032876 IPR003961
H6WXP6
1 947
Architecture
STR
ATT
STR
STR 241-538 | ATT 539-681 | STR 682-941 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
H6WXP6
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,8449
Central domain 307 522 217 0,5646
C-terminal 523 947 424 0,0446
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-522
C-terminal
523-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVp-1
[NCBI] 		1150989 Uroviricota > Caudoviricetes > Demerecviridae > Vipunavirus > Vipunavirus pVp1
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFB84012.1 [NCBI]
Genbank nucleotide accession
JQ340389 [NCBI]
CDS location
range 101018 -> 103861
strand +
CDS
ATGAGTAATATATTAGACTCAGCCAAGAAGTATATAGAAGAAACAGAAGAAATAAATTTAGCACATCTAATCTCCCTAGAGCTACCTGGCAGTTCAGGTGTTTTTATATACTTAACAGATTATTTTAGAGATATTACTTATAAAGGTCAAGTATATAAATCGGGAGTAATTAAAAGAGTAGGTGATGTAAAACAGACTAAAGAGCTAACAATCTATAGAGTCCCAGTACAAGTAAGTGGGGCTATAGATGAAGAGATAGACAGAGTGCTAAATTCTAAGAGCTTTTTGAATAGAAAACTAAAAATAGATAGAGTATTCTTAGATGAAGATGGTGAGATTATTCAAATATATGCGGATGGCAGTACCATTACCTACTTTGAAGGGGTTATAGTAAGTAGTGCATTAGACGAGTCAAATACTAATAAAGGTAAAGGACGTTCTGTAATTACATGGAACTGTGCTAGTAAGCTATACGCACTTGATGCCATTAACGGCAGGCTCACGGATGATGCATCTCACCGAGGATTGATCAATGTAAACGGAATTATGCAACCCTCAAGCAGTGCCAAAAAGCCAGAGTATCAATTAGATAAGGGCTTCTTCCACGCCAATAAGTCCGTCAAGCTGCTAGCTGAATACCAGACAAAAGAAAAACGTTATCGTCTAAAGAAAAGACGTGCTGGAGGCTTCCGTGGTCTTATGGGACAAAAACATTATGACATGGAAGAATACTGGGCAAATGTAGTAAAAGAAGTAGATATGGATATAAACCTTACTGCCAAATATTTACCTGTAGTATACGGGGTACAGAAGGTTGCCGGTATACCTATTTTCTTTGATACGGATATTAATAACCCAGAAGAAATATGGGCTGTATATGCGTTCTGTGAAGGCGAGATAGATGGATTTCTAGATATATTTTTTGGGGATAACCCAATGATTTGTATATCTGAAAATGACCAATCTAAACGAGCTTGTGTAGGGATGAAACGTAACAACGGTGACACTATAGGAGCTCTAGCACCTGCTAGTGGAAGAACTGTACCTAGTAAGCATGGTGAGCACTATGTTTATGATGATGGTAATGGGCCTATAGACTTCTGGACGTTCCATGGGTCGGTAACTCAGGATGCTGCAAAAGTACTTGTGGATAAAGCATCAGCAGGATCATTCAAGTTACAAAATGACGGTAACTATGGGGCAGAGTACTGGGATGACTCATTTAAGCTAACGGACACTGCTTACCTAGTTGTTAAGTTCGAACTAAATGAAAATAGAACCTCAATACCTGAAGTATCGGCAGAAATCCAAGGTAAGAAGATACCAGTATACCATGAAGACGGGACAGTAACTGCGGATAGAACCTCCTTGAATCTAGCATGGCAAACACTAGACTATTTACGTAGTACAACTTACGGGGCAGGACTTACTTTAGATGAGATTGACTTGGCTTCTGTAAGAGAATGTGCTAAGTATATGGATGCAGTAGATACTTCATATGACCCTGACTGGGTTCCTTATTGGCGATACCTAGGTTGGGAGGATTATACAGCAGAGAATAGACAAATACTGCAAGGATCCGCTATCCTATCTACTAGTGATACTGTGTTTAAGAATGTGCAATCCTTGATTGCTCAATACGATGCTTCTTTAAATATAGTTAGTGGTAAGTATACTCTGACTATGGAGGCAGATAAGCCAGTAGTATATGATATAAATGAAGGAGATATAATTGATGGTAGTATCAAAGTCTCTGACAACTCTATGGAGAACAAGTATAACTCCATCCAAGCAAGTATAATTGATCCTGCTAATGCATGGGGTAGTAATACTATTACCTTCTTCAATAAAGATTATAAGATAGAAGATAATGGGAAGGATAGAAAAGCAAACGTAACCTTCCCTTTCATAACTAACTACTATACTGCCCGTACAAGAGCCGAGTATTATTTAAGGAAGTCTAGATATAACAGAACTGTTTCATTTAGTCTACCGTTTACTTTCTTATGGCTATACCCAAATGCTAATATAACTCTAAGTGTAAAGAGATATGGGTGGGACAAGAAGCATTTCTTAATCCAAGATATGACTTGGAAAGCAAATGGGCACATTATGGTAACTGCTAGAGAATACGCTCCAGATGTGTTTATAAACTCTACGCAAACAGATAACAGTGATGATCAGATACCTGATGTAGTTGTAAGTGTATTACCTCCACGAGATCTACAGTATGATCCTAAGTTAGGCGAGCCTGAGGTAGGACTAAACGGTACTCTTTCATGGTTACCAAGTTTAACTAAGAGGGTGTCATACTATACTATTAAATACACAGGATTGGTAGATTTAATTACTGTACCTGTATCTGGCACAGCTCCACTGAACTCAAGAGTTACTCTCCCTCTATATAATCTAGCAGAGGGAGAGTATACCTTTGAGGTTAGAGCAGTATCTCCAGATGGTGACACTAGCCTACCAGCTAAGTTGGTAGTTAATGTTAACCCTAGTGCTATTCTACCTAAAATCGAAAATCTTAGACTTATAAATAGAACAGATACATCTGCAAAAGTATTTATAGGTAAAGATGTAGAGCTTATGTGGGACGAACTACTGGAAGGTGCTTCGGTTTCAGGCTTTAGATATAGACTTAGATTTTTAGATGGCGATACTGGTGAGGTTTTACGAGACACCACTACTACCTCTACCTCTTTTATTTATACTTATGATATGAATAAAGAAGATTATAAAAGAACACATGGAACTCTCGGTATATGTAGAAATATTATAATATATATTCGAGGAGAAGCTGATAACAATATAACTTCAATTGATTGGACAATACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
955774479013b4529d369fd8352fc29d9dc2ab6c823650dedc97dee95fb3f361
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50