Protein

View in Explore
Genbank accession
QIG74955.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MGKKNAGALAFGSPSFRIGAGGRLRLGTGAVSPWYDPNALEVDFINGRFAKNGVVYADQAAFLLGLKGSDSAAAAGVTSGRLTVGNYVSPGITEELIDPTFSTGTPWVPRQSSGGPATASIVSDVLRLQGNGAVNPGVDQKINPLKSKAYRLTGTVGRGTSGVGNQLGVGSSPGFGTPIAQSPLTPSTNTYTHNFSTVGSAAAPDTYIGMKSSGTVAGSNYSTADNFSCKECWPFEGFQPGFVSGRIRFRSCADGVGTYNLLQFDNNAVNGTTAIENSWIRIREVAGVMQLVIVYETAAGTATTQTIMSLGAVEPSTDHYIDFGVAPGFAAASMDGGAPTNFLLGNMPGIAYMRMHYGRLTTGNLWDNTNTWLTLYNNLIYPAGANPASFVNYGDSYGRIGGYVRTATGLILRDKSSGGLELQAIYDIVLANPSTYGKPTVFWDGKPNGNPSGTTDYLNMIEAIGNLIGWSNFAISGPVKTIIGSGENAGIDARRSGIQALCATHGGYYIDGQAILAAHGDGSAGDNAAIAGGVCPPSLLEPDGVHINATGNGWVAGNSTAAGTFAKALKDMGAY
Physico‐chemical
properties
protein length:575 AA
molecular weight: 59358,60660 Da
isoelectric point:6,09635
aromaticity:0,09217
hydropathy:-0,06087

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG74955.1
1 575
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,1986
Central domain 158 356 200 0,4111
C-terminal 357 575 218 0,5011
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-356
C-terminal
357-575

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I65
[NCBI] 		2509738 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74955.1 [NCBI]
Genbank nucleotide accession
MN988541 [NCBI]
CDS location
range 21853 -> 23580
strand +
CDS
ATGGGGAAGAAGAACGCTGGTGCACTGGCCTTTGGCTCTCCATCCTTCCGGATTGGTGCTGGCGGTCGCTTACGCCTCGGAACCGGCGCTGTTTCGCCGTGGTACGATCCCAACGCCCTGGAAGTGGACTTCATCAACGGTCGCTTCGCCAAGAATGGCGTTGTGTACGCCGACCAGGCAGCTTTTCTTCTCGGTCTGAAGGGTAGCGATAGCGCGGCGGCGGCTGGGGTAACGTCCGGTCGCCTCACGGTTGGTAATTATGTGTCTCCCGGCATCACAGAAGAGCTTATTGACCCGACATTTTCGACGGGTACGCCGTGGGTTCCTCGGCAAAGCTCGGGCGGGCCTGCCACGGCGTCGATTGTATCAGACGTTCTTCGTCTGCAAGGCAATGGCGCAGTCAACCCGGGCGTTGACCAGAAGATCAACCCGCTCAAAAGCAAGGCGTACCGTCTCACAGGCACCGTGGGTCGCGGAACGAGCGGGGTTGGTAATCAGTTGGGGGTCGGATCTTCCCCCGGCTTCGGCACTCCGATTGCTCAGAGCCCGCTGACCCCGTCCACCAACACCTACACCCACAATTTCTCAACAGTTGGATCGGCGGCGGCTCCTGACACCTACATAGGCATGAAGTCGTCCGGCACGGTTGCGGGTTCGAATTATTCAACTGCTGACAACTTTTCGTGCAAGGAGTGCTGGCCGTTCGAAGGCTTCCAACCGGGTTTCGTTTCGGGGCGGATCAGGTTCCGTTCATGCGCGGACGGGGTCGGCACCTATAATCTGCTGCAATTTGACAACAATGCGGTGAACGGCACCACCGCAATCGAGAATAGCTGGATCAGAATTCGTGAAGTCGCGGGGGTCATGCAGCTGGTCATCGTTTATGAGACCGCCGCCGGAACTGCGACCACTCAAACCATTATGTCGTTGGGAGCCGTCGAACCGTCAACAGACCATTATATTGATTTCGGCGTTGCTCCCGGCTTCGCAGCAGCAAGTATGGACGGTGGAGCCCCCACCAACTTCCTCTTGGGCAACATGCCCGGGATCGCTTACATGCGCATGCATTACGGTCGCCTCACGACCGGCAACCTCTGGGACAACACCAACACATGGCTCACGCTTTACAACAATCTTATTTATCCTGCTGGAGCCAACCCAGCGAGCTTTGTCAATTACGGTGACAGCTATGGCCGCATTGGTGGTTACGTCCGGACGGCGACCGGCCTCATTTTGCGCGACAAATCCTCTGGCGGTTTGGAGCTTCAGGCGATCTACGATATTGTTCTGGCGAACCCGAGCACCTACGGAAAGCCGACAGTGTTCTGGGACGGAAAGCCCAACGGCAACCCATCAGGCACGACCGATTACCTGAACATGATCGAAGCGATTGGTAATCTCATCGGTTGGAGCAATTTCGCGATCTCGGGACCGGTCAAGACGATCATTGGTTCAGGTGAGAATGCCGGTATTGACGCCCGCCGTTCGGGTATCCAGGCGCTATGCGCTACGCATGGTGGTTATTACATCGACGGTCAAGCCATCCTCGCCGCTCATGGCGACGGCTCGGCGGGGGACAATGCGGCAATTGCGGGCGGCGTCTGCCCGCCGTCGCTACTGGAACCAGACGGGGTTCATATCAACGCGACCGGTAATGGTTGGGTAGCGGGAAATTCTACTGCTGCCGGCACCTTTGCGAAGGCTCTCAAGGATATGGGAGCTTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c35198bc4b1fa68c8ac4205b7e0a94ce03ec8cfcde1279d93747542c49056f17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank