Protein

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Genbank accession
UJD04706.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESAIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTVINSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPSTTVDNTGRIDPSTTGFFYVKSAAFQKRWNITVTSAGVDYSGDYSAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGNTYAGVSNQSRVDQEQDLPAQLPAEAGGAMCRVGTASSETAWYQFDYGTRTWSEVGAYGSITNITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSSVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPSVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELMIGQALRMDLATITVPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85800,06020 Da
isoelectric point:5,05545
aromaticity:0,08651
hydropathy:-0,24326

Domains

Domains [InterPro]
DC_0058
STR
1–786
DC_0058
IPR058003
TTP
5–786
IPR058003
UJD04706.1
1 786
Architecture
STR
STR 1-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD04706.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9925
Central domain 146 344 200 0,1686
C-terminal 345 786 441 0,1102
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-344
C-terminal
345-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp3
[NCBI] 		2863272 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD04706.1 [NCBI]
Genbank nucleotide accession
MZ634340 [NCBI]
CDS location
range 16176 -> 18536
strand -
CDS
ATGGCTACGTCCCTAGAGGGTACCATTCAGAGCTTGCTGCAGGGTGTTTCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAGCTGGGGGCGCAGCTGAACATGCTCAGCGACCCAGTTTCCGGTATCCGCCGCAGGCCTCCGGGCGAGATTGTCTGGGAGAGCGCGATTGATAATCCAGGGCTCGATTCCCTGTTCACGGAATACGTAGAGCGTGGAACTGATGGCAGGCACCTGCTTATTAACACCAGCAACGGTAATTGGTGGCTGCTAGCCAAGAACGGAAAGACCGTTATTAACTCAGGCAACGACCCATACTTCGTTACCACGGTAGGCCAGACCTCTTTGCAGACGGCAAGTATTGCAGGGCTGACTTATATACTGAATACGGAGATGGCTCCAAGCACAACCGTGGACAACACTGGGCGCATCGACCCCAGCACCACTGGGTTCTTCTACGTTAAATCTGCAGCATTTCAGAAACGTTGGAACATCACCGTTACCTCGGCTGGGGTGGATTACTCCGGGGACTACTCCGCCCCGGCTGCTGGTAGCACTAGCGGTAACGCTGAGGAGGTATCTGGTGCTTACGTTGCTCAGCAACTGCGAGACTCTCTTGTAGCGAACGGGTTGCCCGCTGGGAACGTGAGCGTACGCGGCGCGTACCTGTTCTTCTACGGGCTGAGCAACTGCGTGGTATCCTCTGACGCTGGCAATACTTACGCAGGGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCGCAGCTCCCGGCAGAAGCTGGTGGGGCAATGTGTCGTGTAGGTACAGCTTCTTCCGAGACAGCATGGTACCAGTTCGATTACGGTACCCGTACCTGGTCTGAGGTGGGGGCGTACGGTAGCATCACCAATATTACGAATATGCCCAGAGAGCTCGCCGCGGATGACAACATCATCGCGCGGGATTGGGAGGGGCGTTTAGCGGGCAACGACGATAACAACAGTAATCCTGGGTTCGTCGAGAACGGTTACATCACCGGCATTGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGTGGTAGCTCCGTGGATATGTCAGCCTCTGGTCTGTATCAGCGCTTCTACCGCTCTACCGTGACTTCCCTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGCACAGCTGTGCAGTTTAACCGGGACCTGGTCCTGTTTGCTAATAGCATGCAGGCGGTTGTGCCGGGTTCGTCAGTACTTACGCCAACTAACGCAAGTATTAGTATTACCAGCACCTACGACTGTGACAGCCGTGTTACCCCGGTAATGGCGGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCAGGTATACTGGAGCTAATCCCATCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCGGGCAGGGTGTTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCACGCATGTCTGGGGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCAGCGTGGCATAAGTGGTCGTTCCCGTATCCTATACTGAGCGTACAGGCGCTGGAGGATGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAGTACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTGCAGGGTGGGGTGTTCACTGTCCCGTCGGTATTGCGCCCGGTTGGGTGGGCTGACAATTACAAGGAAGAGCTTATCCTAACGTACCTGCCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCGCGGCGTACCGGATGGCACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACGCCTATTCTACGGGACCAGAATGACAAGCTCGTGGGAAGTGGGCATGTGCGCCTGCTGCGTCTGGACGTGGCAGTACGTAACTCTGGGCACTTCGACGTACAGGTACTAGACACCCCTCGGGACGTCAATTGGGGCGGGGAACTGACTGGTATCCTGATGAACTCAAAGGAGCTGATGATTGGGCAGGCTCTGCGTATGGACTTGGCTACGATTACCGTACCATGCCGCACCAACGCAGACACAACCGAGGTGTCACTATTTACTGATGGTTCTATGGAACTGAACGTGCTGGATATCTCGTACATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4cd8af73b515e9f7a6bd4cd1cada6be9b78c1582cf9da360eb577b50d399ff3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank