Protein

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Genbank accession
YP_009204843.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALAELVKVPSWIGTTLYSATGAVKRSLLSRLSDRISVRDFGATGDGVTDDTAAVQSALNWVASVSGRSLYFPDGTYKVSALVCTFAANTMQQRIYGPGRLRHSASSGDMLTIQDGMYCEIELNIIGDGYTLPLPDYTQADPTGCQQAVVLNSSRACSLKINAHGYPGRVLRTKSTRTIKLSFLRLSIVTGNDTCAQGMYLEGGADAWGCIEHGNCNWDYYGSVAKNLTDFSVVYMESGSKGGGDPCVHLDNVQNAHIGTLALGQNRTAPALRITGGRAITIQKALLGESTYGLEVIGSGTGQPYPQVTIHSLYVANADSGGVRFSNAINCEVKDFTFDGVPYGFVYFNLCRDISVNGHSRNPSIATHYAYPGSTLQNLHIRGKHYTAGSSTFCDFSAASSTENVWLWDTTVITTGYYVKVANDSSGVNAFGGNWSGSTLAGSPPITHRLQSIKGIAGINTRRTARVGTFSAGSASGTKLTVAHGLLNTPSEVFITVQDPADVVSAGSSGVLLYSKDSTNLVFKYSGATTLANDLSFLWTAKSEERAN
Physico‐chemical
properties
protein length:548 AA
molecular weight: 58262,59070 Da
isoelectric point:7,56330
aromaticity:0,08942
hydropathy:-0,09015

Domains

Domains [InterPro]
DC_2249
ATT
1–170
DC_2249 DC_1132
IPR012334
STR
9–511
IPR012334
IPR011050
STR
33–417
IPR011050
IPR024535
ENZ
36–83
IPR024535
YP_009204843.1
1 548
Architecture
ATT
STR
RBD
ATT 1-170 | STR 171-511 | RBD 512-548
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009204843.1
1 548
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9320
Central domain 50 452 404 0,9823
C-terminal 453 548 95 0,9841
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-452
C-terminal
453-548

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_SU552A
[NCBI] 		1610835 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009204843.1 [NCBI]
Genbank nucleotide accession
NC_028870 [NCBI]
CDS location
range 41802 -> 43448
strand +
CDS
ATGGCACTTGCAGAGTTAGTAAAAGTACCCAGTTGGATTGGAACTACGCTGTATTCAGCTACTGGTGCAGTCAAGCGGTCCCTGTTATCACGCCTATCCGATAGGATTTCAGTGCGTGATTTTGGGGCCACGGGGGACGGTGTAACGGATGACACGGCAGCTGTACAGAGTGCACTTAATTGGGTAGCCAGTGTTAGCGGGCGCTCCTTGTACTTCCCGGATGGTACCTACAAAGTTTCTGCACTGGTCTGTACTTTTGCGGCTAACACTATGCAGCAACGTATATACGGCCCCGGTAGGCTGCGGCACTCCGCCTCTTCGGGGGATATGCTGACTATACAGGACGGTATGTACTGTGAGATTGAGTTAAATATAATTGGCGACGGTTATACTCTTCCTCTCCCGGATTACACCCAAGCAGACCCTACCGGGTGCCAGCAGGCGGTGGTGTTAAATAGCAGCCGTGCTTGTAGCTTGAAAATCAATGCACACGGGTACCCAGGCAGGGTTCTACGCACCAAGAGTACGCGCACTATCAAGCTGAGCTTCTTACGCCTCAGTATCGTCACGGGTAATGATACCTGTGCCCAGGGTATGTACTTAGAGGGCGGTGCGGATGCCTGGGGCTGTATTGAGCACGGGAACTGTAACTGGGACTACTACGGCAGCGTTGCTAAGAACCTAACAGACTTCTCTGTGGTGTACATGGAATCCGGCTCTAAGGGCGGTGGGGACCCTTGCGTGCACCTGGACAACGTACAGAACGCGCACATCGGAACACTGGCACTTGGTCAGAACCGCACTGCTCCGGCTCTGCGCATCACTGGTGGTCGCGCTATCACTATACAGAAAGCGCTGCTTGGGGAATCTACTTACGGTTTAGAGGTTATTGGCTCTGGTACAGGGCAACCTTATCCTCAAGTTACTATACATTCCCTGTATGTGGCTAATGCGGACTCCGGGGGCGTACGTTTCAGTAACGCAATTAACTGCGAGGTGAAGGACTTTACATTTGACGGGGTCCCGTATGGGTTCGTGTACTTTAACCTGTGCCGGGATATTTCAGTCAACGGGCACTCTCGTAACCCTAGCATCGCTACGCACTACGCGTATCCTGGGAGTACCCTGCAGAACCTGCACATCAGAGGTAAGCATTATACCGCGGGCAGCAGCACGTTCTGTGATTTCTCTGCAGCGTCTAGTACCGAGAACGTCTGGTTATGGGATACTACAGTAATCACCACTGGGTACTACGTTAAGGTTGCGAACGACTCCAGCGGCGTAAACGCTTTCGGCGGTAACTGGTCTGGTTCTACTCTTGCTGGCTCCCCTCCGATTACGCATCGTTTGCAGAGTATCAAGGGGATTGCTGGTATAAATACTAGGCGTACAGCACGGGTCGGTACGTTCTCTGCTGGTTCTGCTAGTGGTACTAAGCTGACAGTGGCGCACGGGCTGCTTAATACTCCGTCGGAAGTATTTATCACTGTGCAGGACCCGGCTGATGTAGTATCTGCCGGTAGCTCCGGGGTGCTCCTGTACAGTAAGGATAGCACTAACCTGGTGTTTAAATACAGCGGTGCTACTACCCTAGCCAACGACCTCAGCTTCCTCTGGACGGCTAAGAGCGAGGAACGAGCTAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
704e5f854ee514c675c59ecebe47832c5f4fb011b2e651f6b8016c5657f13011
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A suggested new bacteriophage genus, Kp34likevirus, within the Autographivirinae subfamily of Podoviridae Eriksson,H., Maciejewska,B., Latka,A., Majkowska-Skrobek,G., Hellstrand,M., Melefors,O., Wang,J.-T., Kropinski,A.M., Drulis-Kawa,Z. and Nilsson,A.S. — — GenBank