Protein

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Genbank accession
WYV99990.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAEAPKTTVTYPLDGANRDFLIPFEYLARKFVQVTLVGVDRKVLTLNIDYRFTQRTIVTTTKNWGPADGYNLIEVRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNVADGTGDFDAVNLRQQKQWAGSALNQADRAQREADRATVQANASQASNAQSAAQAQESLKWANESSRHAGLSKASAEASQTSNVQSFQNLQAAQAQVAEATKQAGLATSNGAAQVQLATAQANRSRDEADRSTAQANASAGSAVTSKNEADRSTREADRAKTEADKLGNMNALATAIREVNVAATKVEVAAGWEWNADVMAVDKFRSRNSASITFNAQLVGALGASFVNRIYTQADVQAGGEVAAGVSLRVRGAGSNAHLWFMQPDGNENALLYAEPNGTMHMRTRAQADTLTLNADRSVDVGTNFRVGGASSTAGRHTATELMSNTHSWTGGGASWLASDGNVYGPTWGGYLSTWLGSQLGSKQPKHHFQSGRVGVGAPGGGYRQFRINFHQAMAGAVVQITIHRPALHVAVGARGEAWVDGIDVNGFTCWVHCESGAAWDTYIDWIAVQTVNVGA
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63539,25670 Da
isoelectric point:6,33206
aromaticity:0,07059
hydropathy:-0,38403

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil Coil G3DSA:6.20.70.20
DC_0474
STR
1–593
DC_0474
IPR011049
STR
115–153
IPR011049
WYV99990.1
1 595
Architecture
ATT
STR
ATT 1-131 | STR 132-593 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYV99990.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 333 333 0,9392
Central domain 334 532 200 0,2893
C-terminal 533 595 62 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-333
Central
334-532
C-terminal
533-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Eino
[NCBI] 		3132624 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYV99990.1 [NCBI]
Genbank nucleotide accession
PP496420.1 [NCBI]
CDS location
range 35072 -> 36859
strand +
CDS
ATGGCTGAAGCTCCAAAGACTACGGTAACGTATCCGCTTGACGGTGCGAACCGAGACTTTCTGATCCCCTTCGAGTACCTTGCCCGGAAGTTCGTGCAGGTCACCCTCGTGGGTGTGGACCGGAAGGTATTGACCCTCAACATCGACTATCGCTTCACCCAGCGTACCATCGTCACCACGACGAAGAACTGGGGTCCGGCTGATGGTTACAACCTGATCGAAGTGCGCCGATATACCTCTGCTACAGAGCGTCTGGTGGACTTCAGTGACGGTTCGATCCTCCGTGCGTATGACCTGAACACCTCTCAGGTTCAATCGCTGCACATCGCTGAAGAAGGCCGTGACATCGCGACCGACACTATCGGCGTGAACAACGATGGTGACCTTGATGCCCGTGGTCGTAAGATCGTGAATGTGGCTGATGGCACCGGTGACTTCGATGCGGTGAACCTGCGACAACAGAAGCAGTGGGCAGGCTCTGCATTGAACCAAGCTGACCGGGCACAGCGTGAAGCTGACCGTGCAACCGTACAGGCCAATGCGTCACAAGCGTCCAACGCTCAGTCGGCTGCTCAGGCTCAGGAGTCCCTTAAGTGGGCCAATGAGTCCTCTCGCCACGCTGGTCTCTCGAAGGCATCCGCTGAGGCGTCCCAAACGTCCAACGTACAGTCCTTTCAGAACCTTCAGGCAGCTCAGGCGCAAGTCGCCGAGGCTACCAAGCAGGCGGGCTTAGCGACCTCTAACGGTGCCGCTCAGGTCCAACTGGCGACCGCTCAGGCTAACCGTTCCCGTGACGAGGCAGATCGTTCGACCGCTCAGGCTAACGCTTCGGCTGGCTCTGCGGTGACCTCTAAGAACGAGGCTGATCGTTCCACTCGTGAGGCAGACCGTGCGAAGACTGAAGCTGACAAGCTCGGTAACATGAACGCACTGGCTACTGCGATCCGTGAGGTGAACGTGGCCGCTACGAAGGTCGAGGTCGCAGCCGGGTGGGAATGGAATGCTGACGTTATGGCTGTGGACAAGTTCCGCTCTCGAAACTCGGCAAGCATCACATTCAACGCCCAGCTTGTAGGCGCTCTTGGTGCTTCGTTTGTGAATCGTATCTACACTCAAGCGGATGTTCAGGCGGGTGGCGAGGTTGCAGCGGGCGTGTCTCTTCGGGTACGTGGTGCAGGATCGAACGCACACCTATGGTTCATGCAGCCTGACGGTAACGAGAACGCCCTGCTGTACGCTGAGCCGAATGGTACGATGCACATGCGGACGCGCGCTCAAGCAGATACATTGACCCTGAATGCCGACCGCTCGGTTGACGTTGGCACTAACTTTAGAGTGGGTGGTGCGTCCTCTACTGCTGGTCGCCACACCGCTACCGAGCTAATGTCCAACACTCACTCGTGGACAGGTGGAGGTGCCTCGTGGCTTGCCTCTGACGGTAACGTCTATGGGCCGACATGGGGCGGCTACCTGTCTACATGGCTGGGAAGCCAGCTTGGTTCCAAACAGCCCAAGCATCACTTCCAAAGCGGTCGCGTAGGTGTAGGTGCTCCGGGTGGCGGTTATCGACAGTTCCGCATCAACTTTCACCAAGCCATGGCGGGAGCTGTTGTCCAAATCACGATCCACCGACCAGCCCTGCATGTGGCGGTTGGCGCTCGTGGCGAGGCGTGGGTAGACGGTATTGACGTGAACGGTTTCACTTGCTGGGTCCACTGTGAGAGTGGTGCTGCATGGGATACTTACATTGATTGGATTGCAGTGCAGACGGTTAACGTCGGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4df834e4004407d56d34d89c418464f101e1d3ec83380c616a4855e69a282b7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7132
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank