Protein

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Genbank accession
QGT53569.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTFSVNYNGVELSELVSGFTAIDRGFGSVWNNTLSNQVARYGQSFVKNTLSAKKITITIRKSGIPSDWIALRKELAKVLDVNEPAPLIFGDEPNKVWYAVADGTQALSEDISNLVASGTLTFIVPEGHAYSTYTNVLNSDNSGGVNGSITPNADGSVDITINNQGTLPTWIDLKLTNNHDNGYFGIAGVNGSLELGNREEVDGVTIKHSDILYDSKTDPKFSKFVSAAGQPHPEWTGAGTNGTIGYQEYNYKSSNGQQKTMKGVKLINPGSQTGFRGGMAELVLPPDSNGDSGAVNFYAWFRLFTWTTVLGQTGVMQILFTDIVPELKDVAIHKVKFFFGNWSTNPRGTMTHMVIRDFWCRKDFVNTWNDLPNLYKNGSVVEIDMASGNVSKDGISAITEVVNGTEPFSIPPGISQIKIIQSSWNNTPPDVEISWQERIL
Physico‐chemical
properties
protein length:440 AA
molecular weight: 48086,27730 Da
isoelectric point:5,17061
aromaticity:0,10000
hydropathy:-0,25773

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–130
G3DSA:2.40.30.200
DC_0077
STR
1–440
DC_0077
IPR006520
Unmapped
5–130
IPR006520
IPR008841
STR
34–124
IPR008841
QGT53569.1
1 440
Architecture
ATT
STR
ATT 1-130 | STR 131-440
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGT53569.1
1 440
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9675
Central domain 173 371 200 0,3855
C-terminal 372 440 68 0,2575
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-371
C-terminal
372-440

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage CHPC974
[NCBI] 		2675262 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT53569.1 [NCBI]
Genbank nucleotide accession
MN689530 [NCBI]
CDS location
range 12779 -> 14101
strand +
CDS
ATGACATTTTCAGTTAATTACAATGGTGTTGAACTATCTGAATTAGTAAGTGGATTCACAGCAATTGATAGAGGGTTTGGTTCAGTTTGGAATAATACACTATCAAATCAAGTAGCTAGATATGGTCAATCATTTGTAAAGAATACATTAAGCGCAAAAAAAATTACTATTACCATTAGAAAAAGCGGAATTCCAAGTGATTGGATAGCCTTAAGAAAAGAATTAGCAAAGGTGCTGGACGTCAATGAACCAGCGCCTTTAATTTTTGGTGATGAGCCTAATAAAGTTTGGTATGCAGTAGCAGATGGAACTCAAGCCTTATCAGAAGATATCTCTAACTTAGTTGCTTCTGGAACTCTTACATTTATAGTCCCAGAAGGGCACGCTTATTCGACATATACTAATGTTTTAAACTCAGATAATTCAGGTGGAGTCAATGGTTCTATCACTCCTAATGCTGATGGTTCGGTTGATATCACAATTAATAATCAAGGAACATTACCGACTTGGATTGATTTAAAGCTTACCAATAATCATGACAATGGGTATTTTGGTATTGCTGGGGTTAACGGAAGCTTAGAATTAGGTAATCGAGAAGAAGTTGATGGTGTTACTATCAAGCATAGCGATATTCTTTATGATAGTAAAACTGATCCTAAATTTTCTAAATTTGTATCAGCCGCAGGTCAACCCCATCCAGAATGGACTGGTGCAGGAACAAATGGAACAATTGGGTATCAAGAATATAATTATAAGTCTTCCAATGGGCAACAGAAAACAATGAAGGGTGTTAAGTTGATTAATCCTGGAAGTCAGACAGGTTTTCGTGGAGGCATGGCAGAGCTTGTCTTACCACCAGATTCAAATGGTGATTCTGGTGCAGTTAATTTCTATGCTTGGTTCAGATTATTTACTTGGACAACTGTTCTTGGCCAAACTGGAGTCATGCAAATTCTATTCACTGATATAGTCCCAGAACTTAAAGATGTCGCAATTCATAAGGTTAAGTTCTTCTTTGGGAACTGGTCAACTAACCCAAGAGGAACGATGACACATATGGTTATTCGTGACTTTTGGTGCCGCAAAGACTTTGTTAATACATGGAATGACTTACCAAATCTCTATAAAAATGGCTCAGTCGTTGAAATTGATATGGCTAGTGGTAATGTATCCAAAGATGGAATATCAGCCATTACAGAGGTAGTAAATGGAACAGAACCTTTCAGTATTCCACCTGGAATTAGTCAGATCAAAATCATTCAATCATCTTGGAATAATACACCACCAGACGTTGAAATATCATGGCAAGAAAGGATTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c349edf2212f897d7c37ddb08af764965e2e18293481f062dd7e1ecc47f2bec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7075
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank