Protein

View in Explore
Genbank accession
XLL18580.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYLNKVIFNKGMTVPGAGSGDNGIFAGPGDSATYDTTNMDIVSWYGIGFKSSQGTAGRTVVINTRNGDISSKGVIEASQIRVTSLSPVNNYDLTRKDYVDGAINIVTANANSSKGRN
Physico‐chemical
properties
protein length:175 AA
molecular weight: 18488,20790 Da
isoelectric point:7,86019
aromaticity:0,09143
hydropathy:-0,37943

Domains

Domains [InterPro]
DC_0466
STR
1–173
DC_0466
IPR005601
STR
56–171
IPR005601
XLL18580.1
1 175
Architecture
STR
STR 1-173 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EPIMRB01
[NCBI] 		3384968 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli ATCC 25922
[NCBI] 		1322345 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL18580.1 [NCBI]
Genbank nucleotide accession
PQ657784.1 [NCBI]
CDS location
range 152784 -> 153311
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACCGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAATAAACCGCAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACTTATTTAAATAAAGTAATTTTTAATAAAGGAATGACTGTTCCTGGCGCAGGGTCAGGTGATAATGGTATTTTTGCTGGTCCTGGTGATAGTGCCACGTATGATACTACAAATATGGATATTGTTTCGTGGTATGGTATTGGTTTTAAATCATCACAAGGAACAGCAGGTAGAACTGTAGTAATTAACACGCGAAATGGAGATATTAGCTCAAAGGGCGTAATTGAAGCATCACAAATCCGTGTAACTTCGTTATCACCAGTAAATAATTATGACCTTACGCGGAAAGATTATGTTGATGGAGCAATAAATATTGTTACCGCAAACGCAAACTCTAGCAAAGGGCGTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9dfbc4ae376409e7083d296a0a56735a7426bdfd05c8fcf7c95c7874f061bdfb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50