Protein

View in Explore
Genbank accession
YP_009845132.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MELKTFFAQDKFGNLVPGATVTVYLSGTTTLATGLKDQAGAALSNPFNADSTGKAAYQAPNGTYDMVIGTADGTTSRIALQFFDYNTVIDAQNQTAANLAAQQALLTQTQDIINNAGDQSTLVRLNQPDAVTIVGAGPQGYGTPPSTTPHLSDVIKRVTPFQFGAKANGTDDDAPAIQAAHDWCMAQSARDPSDTTRRTGGYILDLNGPRYWTIKSSMTWNMGDIIIEGGMSTLDCRQFPVGTDINNQTVVINATYGGAYHQTRSWWRDINMLGPGQSSFCTAIRSNRTAAAPGGYERLSNVFYNGSIEAFGRGLSVGSNSYFQTYYNFSFGHCNEAYYFEPGGKNYGEQITFYSCVFNAGNYQVTTYGGMSNFYGCSFDYCYHQQMVLNGGMINCVNCWWEGYGPVDYIINIPESTTSVRLNIIGGLFSFKAGATGAESRATSNPFYFGTRAAVKFENVQFQKLGNAYYGDSTTAWIDGASQGVSFSGCYFPNSANSFTTVVMNSDPTVINNQFATDSYTLGIGAENWLGDAWILANSDNGLVRKSRWGYGLSNGGTTFSFTRTNNGFVNLDVTQPANSGTFEAVVGMIPVRSTGQVVHYVSGSLYLGTGDGSVNIKTYWVKLIVKGTPSNPDEPQILEMVKATDVNYPIGGTSGQLHNFRWPPSMPTGTQSPASTIMAPDWATHCILTLDISKIKRNMGGIRINEVFMRQI
Physico‐chemical
properties
protein length:713 AA
molecular weight: 77210,07300 Da
isoelectric point:5,44895
aromaticity:0,11921
hydropathy:-0,23787

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009845132.1
1 713
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9907
Central domain 173 522 351 0,9937
C-terminal 523 713 190 0,9810
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-522
C-terminal
523-713

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage MTx
[NCBI] 		2557553 Uroviricota > Caudoviricetes > Lindbergviridae > Myosmarvirus MTx >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009845132.1 [NCBI]
Genbank nucleotide accession
NC_048759 [NCBI]
CDS location
range 22332 -> 24473
strand +
CDS
ATGGAACTGAAAACATTTTTCGCTCAAGATAAATTCGGTAACTTGGTGCCAGGCGCGACCGTTACCGTGTATTTGTCTGGCACAACGACATTGGCCACTGGATTGAAAGATCAAGCTGGCGCGGCGTTGTCCAACCCATTCAACGCCGACAGCACTGGTAAAGCAGCTTATCAAGCGCCGAACGGAACCTATGACATGGTCATCGGAACCGCTGATGGCACAACCAGCCGAATCGCCTTGCAGTTTTTCGACTATAACACAGTAATCGATGCGCAAAACCAGACGGCGGCGAATCTGGCTGCTCAGCAAGCGTTGTTGACGCAGACTCAAGACATCATCAATAACGCTGGCGACCAATCCACCCTCGTTCGATTGAACCAGCCGGATGCTGTGACGATTGTTGGAGCAGGGCCGCAGGGTTATGGCACCCCTCCTTCAACAACGCCTCATTTGAGCGATGTAATCAAGCGTGTAACACCGTTCCAATTCGGCGCTAAAGCAAACGGAACGGATGATGATGCGCCAGCTATTCAAGCCGCTCACGATTGGTGCATGGCGCAGTCAGCGCGTGACCCAAGCGACACGACAAGACGCACTGGCGGCTATATCCTGGACTTGAACGGGCCGCGCTACTGGACAATCAAGTCATCCATGACTTGGAATATGGGCGACATAATCATCGAAGGCGGAATGTCAACGCTTGATTGCCGTCAATTCCCGGTAGGCACCGACATCAACAACCAGACTGTCGTAATAAACGCAACGTATGGCGGCGCATATCACCAAACGCGCTCTTGGTGGCGTGATATTAACATGTTGGGGCCGGGCCAATCTTCTTTCTGTACGGCAATACGTTCCAACCGAACCGCTGCCGCTCCTGGTGGCTACGAGCGCCTCAGCAACGTGTTCTACAACGGCAGCATCGAGGCATTTGGCCGAGGTCTTTCCGTTGGCTCAAACAGTTATTTCCAAACGTACTACAATTTCTCATTCGGCCACTGTAATGAGGCTTATTACTTCGAGCCGGGCGGAAAGAACTATGGTGAGCAGATCACCTTTTACTCCTGTGTATTCAACGCCGGTAACTATCAGGTGACCACCTATGGTGGTATGTCCAACTTCTATGGTTGCTCTTTCGACTACTGCTATCACCAGCAGATGGTGCTCAACGGCGGCATGATTAACTGCGTGAACTGTTGGTGGGAGGGATACGGCCCTGTTGATTATATCATCAACATCCCTGAGTCAACGACGTCTGTTAGATTGAATATCATCGGCGGCCTGTTCTCATTCAAGGCTGGTGCCACCGGTGCTGAGTCAAGAGCGACCTCAAACCCGTTCTATTTCGGCACGCGTGCAGCGGTTAAGTTCGAGAACGTTCAATTCCAAAAGCTGGGCAACGCCTATTATGGCGACTCAACAACGGCATGGATTGATGGCGCATCCCAAGGCGTTTCATTCAGCGGCTGTTATTTCCCTAATAGCGCAAACTCATTCACGACTGTGGTGATGAACTCAGACCCAACAGTGATAAACAACCAGTTTGCAACTGACAGCTACACGCTTGGAATAGGCGCTGAAAACTGGCTAGGTGACGCATGGATTCTGGCGAACTCCGACAATGGACTTGTAAGGAAAAGCCGCTGGGGGTATGGCCTGTCCAATGGCGGCACTACGTTTTCGTTCACAAGAACAAACAATGGATTCGTCAACCTTGACGTCACTCAGCCAGCAAACTCAGGGACTTTTGAGGCAGTGGTTGGGATGATTCCTGTGAGAAGCACAGGTCAAGTCGTGCACTATGTATCTGGAAGCTTGTACCTGGGCACAGGTGATGGCTCTGTAAACATCAAAACTTATTGGGTCAAGCTGATCGTCAAGGGAACTCCAAGCAACCCCGATGAGCCTCAGATTCTTGAGATGGTTAAAGCGACTGATGTCAACTATCCAATCGGTGGCACTTCAGGACAATTGCACAACTTCCGTTGGCCTCCGTCTATGCCTACTGGCACTCAGTCTCCGGCTTCGACTATTATGGCTCCTGATTGGGCTACCCATTGCATACTCACTCTGGACATATCAAAGATCAAGCGAAATATGGGCGGTATCAGAATCAATGAAGTGTTCATGCGCCAGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0025524d4ed79926708b15f2f8eee452339c5747ff00ed6ddb589184c538e5f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50