Protein

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Genbank accession
AOO15312.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MSQLNVDRIISLGGGGGTAYIQLESSGNFNFDTGTLYVDSTNNEVGIGTTTPRASLDIATTDGIIVPVGTTAQRPSSPIEGIFRYNSTDRTFEGYSFNEGTNAVEWGPIAGAGGGTPTQSASRYSPDYSRGAVLKSDGTNAYWEIAGQATEWSMARIWTHGYVGGGYQSGSPWNNVNRTVHSTDTSTNLGNTLDRSGAYMAGSFSDNRHWFHSMENTYRGSSNYTSGFSMTSESGITHQAQWDMTVSRASMGSFQDYEFQGGYSYLIGGGNARTDAFNLKTEVMRTSGFPPNHGDGGDDPTWGGNARLKGWYKRAGTRQALIWNTESWQNWEQGPGGDGWKKILGTMLGHMYVGTGNNNQNGNQRVDDSTGIQNRGLDFGNMGEENFQIGMRKGYCLGNYNGAQNNNTFKVDYANDAFANLGGSSPPTGHGGMSSAHCSSASAISGVDDAGAVQYDYGTNIPNY
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49758,16230 Da
isoelectric point:5,10166
aromaticity:0,11207
hydropathy:-0,66983

Domains

Domains [InterPro]
DC_0841
STR
1–279
DC_0841
IPR059888
RBD
46–111
IPR059888
AOO15312.1
1 464
Architecture
STR
STR 1-279 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12_Np_15_0310
[NCBI] 		2928613 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO15312.1 [NCBI]
Genbank nucleotide accession
KX349308 [NCBI]
CDS location
range 30107 -> 31501
strand +
CDS
ATGTCTCAATTAAATGTTGACAGAATAATATCCTTAGGTGGAGGTGGTGGTACTGCCTACATTCAATTAGAGTCTAGTGGTAACTTTAATTTTGATACTGGCACTTTGTATGTTGATAGTACCAATAATGAGGTGGGGATTGGTACTACTACGCCAAGAGCATCTTTAGATATTGCTACTACTGATGGTATTATCGTACCCGTAGGAACAACTGCTCAAAGACCATCATCACCTATTGAAGGTATATTTAGATATAACTCAACAGACCGAACATTTGAAGGTTATTCTTTTAATGAAGGTACTAATGCTGTAGAATGGGGACCAATTGCTGGTGCTGGCGGCGGAACACCTACTCAATCTGCAAGTAGATATAGTCCTGATTATTCCAGGGGTGCTGTACTAAAATCAGACGGAACTAATGCTTATTGGGAAATTGCTGGTCAGGCAACTGAATGGAGCATGGCAAGAATTTGGACGCATGGATATGTTGGTGGAGGTTATCAAAGTGGTAGTCCCTGGAATAATGTAAACCGCACTGTTCACTCTACAGATACATCAACAAATCTTGGCAATACTTTAGATAGATCTGGTGCTTACATGGCAGGATCTTTCTCAGATAATCGTCACTGGTTCCACTCAATGGAGAACACTTATAGAGGTTCTTCTAACTATACATCTGGATTCAGTATGACATCTGAGTCAGGTATTACTCACCAGGCACAGTGGGATATGACTGTTAGTAGAGCTTCGATGGGTTCATTCCAAGATTATGAATTCCAAGGAGGTTATTCATATTTAATTGGTGGTGGTAATGCTAGAACTGATGCATTTAATCTCAAAACTGAGGTTATGAGAACATCTGGATTTCCACCTAATCATGGTGATGGTGGCGATGACCCTACATGGGGTGGTAACGCAAGATTGAAGGGTTGGTATAAGAGAGCTGGTACTCGTCAAGCATTAATTTGGAATACTGAATCTTGGCAGAACTGGGAACAAGGTCCAGGTGGTGATGGGTGGAAAAAGATTTTAGGCACAATGTTAGGTCACATGTATGTTGGCACTGGCAATAATAATCAGAATGGTAATCAGAGAGTTGATGATTCTACTGGTATTCAGAATAGAGGTTTGGACTTTGGTAACATGGGAGAAGAAAACTTCCAGATTGGTATGAGAAAAGGTTATTGCTTGGGTAACTATAATGGTGCTCAGAATAATAATACTTTCAAGGTAGACTACGCTAATGATGCTTTTGCGAACCTTGGAGGTTCTTCACCTCCAACGGGTCATGGTGGCATGAGTTCTGCTCACTGTTCATCTGCATCTGCTATTTCGGGTGTTGATGACGCTGGAGCAGTTCAGTACGATTACGGCACAAATATTCCTAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1196bcac10b1aebfe2eddb23bd1352948126444294a887003a2bc60a37a098a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3792
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50