Protein

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Genbank accession
WBF69699.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,66
Protein sequence
MPLYTQSIKNLKGGISQQPDILRFSDQGEQQINGWSSESDGLQKRPPTVWKKRLSAVNWVIPNNAKFHLINRDENEQYYIVFTGKEIMVFDLEGNQYAVSGVTDYVNTSKPRDDIRVITVADYTFVVNRRTVVAQGTNKANPTYNMKNRALINLRGGQYGRLLKVGINGGTKVEHQLPPGDNAKDDPPKVDAQAIGKALVDLLVVAYPNYTFTLGSGYIEIKAPAGTNINSVETEDGYANQLINAVLDTVQTISKLPLAAPEGYIIRIQGETNSSADEYFVKYDSAKKTWRETVEPGTVTGFDASTMPHALVRQADGNFTFQTLDWSERGAGNDETNPMPSFVDSTINDVFFYRNRLGFLSGENVIMSRSAGYFAFFPKSVATLSDDDPIDVAVSHPRISILKYAVPFAEQLLLWSDEVQFVMTSSGVLTAKSIQLDVGSEFAVSDNARPFAIGRSVFFAAPRGSFTSINRYFAVADVTDVKDADDTTGHVLSYIPNGVFDIQGSSTENFITVSTEGAPNKLFIYKFLFKDGVQLQASWSHWELEQGEQIIASACIGSAMYIVRKHGYGVDLEKLEFIKETVDIAGEPYRLHLDGKTTMVIPTNAFNPNTYTSSFDVGAAYGGVFPPAGKYVMVDSSGRFVQLPDTVWSNTRWVTVKGDWSGKTVFLGRVYKFTYAFSRFLIKYEDQNGTVTEDSGRLQLRRAWVNYQRTGALVMRVVNQQREFLNTLNGYKLGLQDIGQVNIGDGQFRFPMNGDALHTRLILESDYPTPLSIVGCGWEASYARKAKAI
Physico‐chemical
properties
protein length:789 AA
molecular weight: 87598,56140 Da
isoelectric point:5,68580
aromaticity:0,11280
hydropathy:-0,26312

Domains

Domains [InterPro]
IPR058003
TTP
1–789
IPR058003
WBF69699.1
1 789
Architecture
TTP
TTP 1-789
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF69699.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9927
Central domain 142 346 206 0,1010
C-terminal 347 789 442 0,1972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-346
C-terminal
347-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFP21B
[NCBI] 		3017291 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF69699.1 [NCBI]
Genbank nucleotide accession
OQ031073 [NCBI]
CDS location
range 1949 -> 4318
strand +
CDS
ATGCCACTTTACACGCAATCAATCAAGAACCTGAAGGGTGGCATTAGCCAACAGCCGGACATCCTGAGGTTCTCTGACCAAGGTGAACAGCAGATTAACGGCTGGTCATCCGAGAGTGACGGGCTTCAGAAGCGACCACCGACCGTCTGGAAGAAAAGACTTTCAGCCGTGAACTGGGTCATCCCGAACAACGCTAAGTTCCATCTGATTAACAGGGATGAGAACGAGCAGTATTATATCGTCTTCACAGGAAAGGAAATCATGGTCTTTGACCTTGAGGGTAACCAGTACGCTGTTTCAGGTGTAACGGACTACGTGAACACTTCCAAGCCACGTGACGACATCCGGGTCATTACAGTAGCTGACTACACGTTCGTAGTGAATCGGCGCACTGTGGTGGCTCAGGGGACAAATAAGGCAAACCCTACTTACAACATGAAGAACCGCGCTTTGATTAACCTTCGTGGTGGTCAGTACGGTAGATTGCTGAAGGTAGGAATTAATGGCGGTACAAAGGTTGAGCACCAGCTTCCTCCGGGAGATAACGCCAAAGATGACCCACCTAAAGTCGACGCTCAGGCTATCGGTAAGGCGTTGGTGGACCTGCTTGTCGTGGCCTATCCGAACTACACGTTCACCCTTGGGTCTGGCTACATCGAGATTAAAGCCCCAGCAGGGACCAACATCAACTCGGTGGAGACTGAGGATGGCTATGCCAACCAGCTAATCAATGCGGTACTTGATACTGTGCAGACCATCAGTAAGCTACCTCTGGCAGCACCTGAAGGCTACATCATCCGTATTCAGGGTGAGACCAACAGCTCAGCCGATGAGTATTTCGTGAAGTATGACTCCGCGAAGAAGACTTGGCGCGAGACTGTGGAGCCGGGGACCGTAACTGGTTTCGATGCGTCGACCATGCCACACGCTCTGGTCAGACAGGCAGATGGGAACTTTACGTTCCAGACTCTCGATTGGTCTGAGCGGGGAGCAGGGAACGATGAAACCAACCCGATGCCGAGCTTCGTGGACTCTACGATTAACGATGTGTTCTTCTATCGTAACCGCTTAGGGTTCCTCTCTGGCGAGAACGTCATTATGTCCCGGTCGGCTGGCTACTTTGCGTTCTTCCCTAAAAGCGTGGCGACCCTCAGTGATGACGACCCGATTGATGTGGCTGTGAGTCACCCTCGAATCTCCATCCTGAAGTATGCCGTGCCGTTCGCTGAACAGCTCCTGCTGTGGTCTGATGAGGTACAGTTCGTGATGACCAGCTCTGGGGTCCTGACCGCCAAGTCCATTCAGCTTGACGTAGGCTCTGAGTTCGCTGTGAGTGATAACGCTCGACCGTTCGCTATCGGACGCTCAGTCTTCTTCGCGGCTCCTCGCGGCTCGTTCACCAGCATTAACCGTTACTTTGCGGTGGCCGACGTGACTGACGTGAAGGACGCAGACGATACGACCGGGCATGTGCTGTCCTACATTCCTAACGGAGTGTTCGACATCCAAGGGTCCTCGACTGAGAACTTCATCACGGTGTCGACTGAAGGTGCTCCGAACAAGCTGTTCATCTACAAGTTCCTCTTCAAGGATGGCGTACAGCTTCAAGCCTCGTGGTCACACTGGGAGCTGGAGCAGGGCGAGCAGATTATAGCCTCAGCCTGTATCGGGTCCGCTATGTACATCGTGCGTAAGCATGGCTATGGCGTGGACTTGGAGAAGCTGGAGTTCATCAAGGAGACTGTGGACATCGCTGGCGAACCGTACCGTCTACACCTTGATGGCAAAACAACTATGGTCATCCCGACTAACGCATTCAACCCTAACACATACACATCATCCTTCGACGTTGGTGCGGCTTACGGTGGAGTTTTCCCACCAGCAGGGAAGTACGTCATGGTCGACTCAAGTGGGCGCTTCGTGCAACTGCCGGACACCGTATGGTCCAACACTCGGTGGGTGACTGTGAAGGGAGATTGGTCAGGCAAGACAGTGTTCCTCGGTCGCGTCTACAAGTTCACCTACGCCTTCTCTCGGTTCCTCATCAAGTATGAAGACCAGAATGGGACGGTAACGGAAGACTCCGGTCGACTACAGCTTCGCCGCGCTTGGGTGAACTATCAGCGTACTGGCGCTCTGGTGATGCGTGTCGTAAACCAACAGCGTGAGTTTCTGAACACCCTGAACGGCTACAAGCTGGGACTACAGGACATCGGTCAGGTCAACATTGGTGATGGTCAGTTCCGGTTCCCAATGAACGGTGACGCTCTGCACACTCGGTTAATCCTTGAGTCAGACTATCCGACTCCATTGTCCATCGTTGGTTGCGGCTGGGAGGCTTCATACGCCCGTAAAGCCAAAGCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2375f307111c12c8a6432b9a3f30602efede6958a5aafb28aed95b1c89b2f5d1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3301
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50