Protein

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Genbank accession
UPW38329.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNITRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGARCESEPVDVGVGAPIVYIDTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPIGSYKVRISGQISLPDGVTIDSSGYYEYPTVFEVNYNFVPPTAPTNIEFKAARIADGKERYDLRVQWDWNRGAGANVREFVLSYIDSAEFARTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPGAQDVTDSAVQTFILNESTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTRSGIWMGMDNTTAKPKLDIGNATQYIRYDGDTLRISSGVVIGTPNGDIDIATGIQGKQTVFIYILDTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGADGKPGADGRPGDTGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGTGPVKYDVLTEYKSGAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:700 AA
molecular weight: 75765,03450 Da
isoelectric point:5,41536
aromaticity:0,10143
hydropathy:-0,24529

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551
UPW38329.1
1 700
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-679 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW38329.1
1 700
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,8494
Central domain 410 666 258 0,1679
C-terminal 667 700 33 0,9282
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-666
C-terminal
667-700

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_ESCO30
[NCBI] 		2918879 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus ESCO30
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW38329.1 [NCBI]
Genbank nucleotide accession
OM386657.1 [NCBI]
CDS location
range 32387 -> 34489
strand +
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTTCTAAATAGCGTCTTAACTGGATATACGTTGGCGTATATCCAGCATTCTATTTACTCAGATTATGACGTTATAGGCAGATCTTTTTGGCTAAAAGAAGGTAGTAACATTACTCGTAGAGACTTCACGGGTGTGGATACTTTCTCTGTAACTATTAATAATCTAAAACCTACAACAACTTATGAAGTTCAGGGTGCATTTTATGATTCCATAATAGACTCTGAACTTCTTAATGCACAGATAGGTATTAATCTATCTGATAAACAAACTTTTAAAATGAAATCAGCACCTAGAATCACGGGTGCTCGATGCGAGTCAGAACCAGTAGATGTTGGTGTTGGAGCACCAATAGTTTATATAGACACTACAGGGGAGGCCGATTATTGTACTATCGAGTTAAAAAATAATTCTAATGCTAATAACCCGTGGGTTAAATATTACGTTGGTGCGCTAATGCCAACTATTATGTTTGGCGGTGTACCAATTGGATCCTATAAGGTAAGAATTTCTGGTCAAATAAGCCTACCAGACGGTGTTACTATTGATTCGTCTGGGTACTATGAGTATCCTACTGTTTTTGAAGTTAATTATAATTTTGTTCCTCCTACCGCACCTACTAATATTGAATTTAAAGCAGCGCGTATTGCAGATGGTAAAGAACGCTATGATTTGCGTGTTCAGTGGGATTGGAATAGGGGTGCAGGTGCTAATGTTCGTGAGTTTGTTCTATCCTATATAGATTCAGCAGAATTTGCTAGAACTGGATGGACTAAGGCACAAAAAATTAACGTGGGTGCTGCTCAATCAGCAACAATTATATCATTCCCATGGAAAGTAGAGCATAAATTTAAAGTGTCATCTATTGCCTGGGGACCCGGTGCTCAAGATGTTACTGATTCCGCAGTACAGACATTTATATTAAATGAGAGCACACCGTTAGATAATAGTTTTGTTAATGAAACTGGTATAGAAGTAAATTACGCGTACATTAAGGGTAAGATCAAAGACGGCTCTACTTGGAAACAAACTTTCCTGATAGATGCTGCTACTGGTGCAATTAACATTGGACTTCTAGATGCCGAAGGAAAAGCACCAATATCTTTTGACCCTATTAAAAAGATAGTTAACGTTGATGGAAGTGTAATAACTAAAACCATTAATGCTGCGAACTTTGTCATGACTAATTTGACTGGTCAAGACAACCCTGCAATCTATACTCAAGGTAAGACTTGGGGAGATACAAGGTCTGGTATCTGGATGGGCATGGATAATACTACTGCCAAACCAAAGCTAGATATCGGTAATGCTACACAATATATCCGCTACGATGGTGATACTCTAAGAATTTCTAGTGGGGTTGTGATTGGTACACCTAATGGCGACATTGATATAGCAACAGGTATACAGGGTAAGCAAACAGTATTTATTTATATTCTAGATACTTCATTACCTGCTAAACCAACAAGCCCTGCATACCCACCTTCTGGTTGGTCTAAAACTCCACCGAATAGAACATCTAATACTCAGAATATTTACTGTTCTACTGGTACTCTGGACCCTGTTACTAATCAATTAGTATCGGGAACTAGTTGGTCAGACGTAGTTCAGTGGAGTGGTACAGAAGGTGTTGATGGTAGGCCTGGAGCAGACGGTAAACCAGGTGCCGATGGCAGGCCAGGAGATACAGGACAACGTGGTCCTGGAATGTATTCTCTTGCTATCGCTAATTTAACAGCATGGAATGATTCACAAGCTAATTCATTCTTTACATCTAACTTTGGTACTGGCCCTGTTAAATATGATGTATTAACCGAGTATAAAAGTGGGGCACCAGGAACAGCGTTTACTAGGCAGTGGAATGGTTCAGCATGGGCTAGCCCTGCAATGGTTTTACATGGTGACATGATAGTTAATGGTACAGTAACTGCTAGTAAAATTGTTGCTAATAACGCTTTCTTATCACAAATTGGTGTAAATATTATATATGATCGTGCAGCAGCACTATCCTCTAATCCAGAGGGATCTTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90c5144c44e4038488be5ff7ab8bee12cc37ae650bc0674eada842976ff2dad4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank