Protein

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Genbank accession
GENB_dc4275513a31 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MCKQQNCGCNDPCKPVICVSYVEDSCADRKLATSNTTHPTGYDNVTLITPEVNQISAYKEHLEFVNSPELLSNIPKHSVLRFSQKFLDIISNLFKGRNVGTGAKVYKGSTVLGLDTFQDFKTLKNSSSVDVNNDTNEIIFSVNENWLEAQMPIIPPPIVPDYPVIDGISVGTGVPIYDGITNKKIKISSLKSNTLNISKLLDGTVKIDSINTEFDYLKAYYINSNYVSTLLSPADGSVSRPFPTWDEARTKMIGTGTILNPENQNVTFILQTNASTALNPTINTLSIKFMNTSLTYTGNDVYMIDSEVLYPLIPKDTNNEITESITLNIFGVGSLHRTTVGGYIRSVGAKRGSSITTNNPNNIIFRIGENENDTLYLEEFVNYPNSIWEGDVLKRDGVTLLGNDYNPPIVLKWTTQVNPTNPLVYVKNNSFGSFTYPVLGKGSLHIETFVNTGLHVENTNINFNKLTILPYSYRISVVQGNAFVPSFPGVYEPKNAPAIYSKNVQWFLNSLYNINIGTFAFNGFDKFFKIEGFFTFHGSTNYHTNHYIKTFADLSTTTQNSFQINGLDKNSNLNSNINYLINSNTVGDFNLKIPSTQLNVVKNISQNVVTNVIPITNGTISSINNKPYLSGINNYVDDAGASVAGLLQNALYFNTTNNAIDKV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 73376,71740 Da
isoelectric point:5,90673
aromaticity:0,10256
hydropathy:-0,20784

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_dc4275513a31
1 663
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,8501
Central domain 259 468 211 0,8664
C-terminal 469 663 194 0,5269
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-468
C-terminal
469-663

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FPSV-D24
[NCBI] 		2801866 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MW448539.1_CDS_[39174..41165] [NCBI]
Genbank nucleotide accession
MW448539.1 [NCBI]
CDS location
range 39174 -> 41165
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
52d6ead66eb80efa26c9285fdefde501c96140c1a6ffa865be549e14c19508fa

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,3758
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50