Protein

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Genbank accession
YP_009824375.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWMGFDREGNTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCYVSTVDFSLDKSVPILNVGIESGKFSEVSTSTPAGSIVQGEVISYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKRFAGDMFYNIEPETDIPLTIRNEHISIDFPSTRITKRLQFSDIYRVEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34454,23330 Da
isoelectric point:4,97798
aromaticity:0,13712
hydropathy:-0,32040

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
YP_009824375.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009824375.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,9268
Central domain 11 209 200 0,0535
C-terminal 210 299 89 0,6060
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Eco_mar003J3
[NCBI] 		2419761 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus mar003J3
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009824375.1 [NCBI]
Genbank nucleotide accession
NC_048203 [NCBI]
CDS location
range 67603 -> 68502
strand -
CDS
ATGTACTACTCTCTAATGAGGGAGTCAAAAGTTATAGTTGAGTACGATGGCAGGGCTTATCATTTTGATGCCCTGTCAAATTACGATATCAATACGTCCTATGAGGAATTTAAAACTCTTCGTAGGACTATACATCGTAGAACCAACTATGCTGACTCTATTATTAATGCACAAACTCCATCTTCAATATCGCTGGCTATAAATTTTAGTAATACCCTTACTGAAGCTAACTTCTTTGAATGGATGGGCTTTGACCGAGAGGGTAACACATTCTTACTACCACTTTATAGTACAAATATTGAGCCAACAATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTGTACTTTGAGAATTGCTATGTATCTACTGTAGACTTTTCTCTAGATAAAAGCGTTCCTATTCTAAACGTAGGAATTGAATCTGGTAAGTTCTCTGAGGTATCCACTTCTACCCCTGCTGGTTCTATTGTTCAGGGTGAAGTCATATCATATAGTCCTCCTAGAGTATCTACCAATAGTAACGTTTTACCAGCTCTTTTATCCGCTTCTATGTCATTCCAGCAACAATGTTCTTGGAGGGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAAATGAATGCTTCGGCAACAATTGCATTTTACTACACCAAGCGATTTGCTGGTGATATGTTTTATAATATTGAACCCGAAACTGACATACCATTAACCATCCGAAATGAACATATTTCGATAGATTTTCCTTCAACACGTATAACAAAACGCCTACAATTCTCGGATATATATAGAGTTGAATGGGATGTAATCCCTACTGCAGACTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8b1abb3be9dae8007bb408290207baac4f6e7ae8534c08f2669ddea8fbe60b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50