Protein

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Genbank accession
XWX31085.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALNFTTITDNNVIKDLTVQVNNIGEELTKERNIFDITDDLVYNFNKSQRVKLTDDKGLAKAYGNITTLKDIKEPGYYYINARAFAMLTDKPDIESIDVVLQVLPLESSNRVVQHLYTLSTNNSQIKTIYRYVSGNSSSEWQFIQGLPSNKNSVISGSNLEDLTSPGVYFVTGMTDGMPDGVSSGFLELNIDANDNRIAKVTDIETGKEYTKVKKPTGVYAEWKKELEPTDMQKYLLSSIKDDGSVTFPLMVYTSSNKTFQQAVLDHVDSTGQTTFTFYVQGGVPGSPMPNSCRGIFISDTSNIASFHGVYTAVGTDGRDVTGSVVGGNWTTPKASPSYKELWTGAQSFSSIGTSKKLEDDISNYSYVEVYTKHKTVEKTKGNDDTGTICHKFYLDGSKTYVCSGTFVSGEKTDKTVPVTEFYRVGINFSGTTWKVVDSAVQNNKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50615,03180 Da
isoelectric point:5,43696
aromaticity:0,10044
hydropathy:-0,39934

Domains

Domains [InterPro]
DC_1773
STR
12–247
DC_1773 IPR057110
DC_0448
STR
195–457
DC_0448
XWX31085.1
1 458
Architecture
STR
STR 12-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX31085.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 322 322 0,5615
Central domain 323 447 126 0,0274
C-terminal 448 458 10 0,9944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-322
Central
323-447
C-terminal
448-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_19
[NCBI] 		2815618 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX31085.1 [NCBI]
Genbank nucleotide accession
MZ417322.1 [NCBI]
CDS location
range 40858 -> 42234
strand +
CDS
ATGGCATTAAATTTCACTACAATAACTGACAACAATGTTATTAAGGATTTGACAGTTCAAGTAAATAACATTGGGGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGACTTAGTATATAATTTTAATAAGTCACAGAGAGTTAAGTTAACAGATGACAAAGGACTAGCTAAAGCCTATGGAAATATAACTACTCTTAAGGACATAAAAGAGCCAGGTTACTATTATATTAATGCAAGAGCCTTTGCAATGTTAACAGATAAACCTGATATAGAATCTATTGATGTAGTACTTCAGGTACTACCTTTAGAATCTTCTAACCGAGTAGTACAACACTTATATACTTTGTCTACTAATAATAGTCAAATTAAGACTATATATAGATATGTTTCAGGAAATTCAAGTTCAGAGTGGCAGTTTATTCAAGGACTACCAAGTAATAAAAATTCTGTTATATCAGGTTCTAACTTAGAAGATTTAACTTCCCCTGGGGTATACTTTGTAACAGGTATGACAGACGGTATGCCTGATGGAGTTAGCTCAGGGTTCTTAGAATTAAATATAGATGCTAATGATAATAGAATAGCTAAGGTAACTGATATTGAAACAGGAAAAGAGTATACTAAAGTTAAGAAACCTACAGGGGTATACGCAGAATGGAAAAAAGAGCTAGAACCTACGGATATGCAAAAGTATTTATTAAGTAGTATAAAAGATGATGGCAGTGTTACATTTCCATTAATGGTTTACACTTCAAGTAATAAAACATTCCAACAAGCTGTTTTAGACCATGTTGATAGTACAGGGCAAACTACTTTTACATTCTATGTTCAAGGAGGGGTTCCAGGTTCACCTATGCCTAACAGTTGCAGAGGTATTTTTATTTCAGATACATCAAATATTGCTAGTTTTCATGGTGTATACACTGCAGTAGGTACTGATGGTAGGGATGTTACAGGTTCAGTAGTAGGGGGTAATTGGACTACCCCTAAAGCTTCTCCTTCCTATAAAGAATTATGGACTGGGGCACAATCATTTTCCTCTATTGGAACTTCCAAGAAGTTAGAAGACGATATAAGTAATTACTCATATGTAGAGGTTTATACTAAACATAAAACTGTAGAGAAAACTAAGGGAAATGATGACACAGGAACTATTTGCCATAAGTTTTATTTAGATGGCAGTAAAACTTATGTTTGTTCAGGAACTTTTGTTTCAGGAGAAAAAACAGACAAAACAGTACCTGTTACAGAATTTTATAGAGTAGGTATTAATTTTTCAGGAACAACTTGGAAAGTAGTAGATAGTGCAGTACAAAATAATAAAACTCAATACGTCACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f93053116c0b2e032ba5d1138d31e535f26b165a1d589df245d02b8c435b8d70
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank