Protein

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Genbank accession
XWX31678.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALNNFTPINENNTMAELTQSHNSIGNELSKPRNIFVILDEVERKVNNAQLKNITTESGLTKAPVGSRILDVKVLGVYYYSASDLASKSDKPDMNSQDVVLVNTPTNNSNNVIQQIFPITTNDNAIQQAYRVVTGNTAGKWVYLKGNIDGKTQSISNQNLNTFMAVGHYMAYNCTNMPSGESEGLLKVYRSDMGTIVQEFISTKTNSRYHRTIGTNENLSWIKSLELGDTFKYGLGNSTSNGDVTFGLLIYTSDNKTFQQAITDHIAKTGQPTFTFYVQGGVTGNPLGTLSGRGIFVCESTSESALANNLYGIYHVVSTLGTLITGSVIGGDWRIPKGSDSTTTMWSGVKEFTSKTTEKMNYSSNDFDYFKVYVTIGGVNNNSIYRQGFEFGKHSANKYKVSSVNVPSSGTTLEYFMCSISFDGDKFTIDEYNTKTNGKCYVTEIVGLKRPV
Physico‐chemical
properties
protein length:452 AA
molecular weight: 49702,99750 Da
isoelectric point:7,00463
aromaticity:0,09956
hydropathy:-0,36637

Domains

Domains [InterPro]
DC_1773
STR
11–243
DC_1773 IPR057110
cd19958
STR
151–212
cd19958
DC_0448
STR
194–450
DC_0448
XWX31678.1
1 452
Architecture
STR
STR 11-450 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX31678.1
1 452
Domain Start End Length (AA) Confidence
N-terminal 1 328 328 0,5071
Central domain 329 441 114 0,0314
C-terminal 442 452 10 0,9949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-328
Central
329-441
C-terminal
442-452

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_22
[NCBI] 		2815619 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX31678.1 [NCBI]
Genbank nucleotide accession
MZ417324.1 [NCBI]
CDS location
range 142910 -> 144268
strand -
CDS
ATGGCTTTAAATAATTTTACACCTATTAATGAAAATAATACTATGGCAGAGTTAACCCAATCACATAATTCTATAGGTAATGAACTCTCTAAACCTAGAAATATATTTGTTATTTTAGATGAAGTAGAACGAAAAGTTAATAATGCACAACTAAAAAATATAACAACCGAAAGTGGATTGACAAAAGCACCGGTAGGTAGTAGGATTTTAGATGTAAAAGTGTTAGGGGTATATTACTATAGTGCTAGTGACTTAGCTAGTAAAAGTGATAAACCGGATATGAACTCACAAGATGTTGTGTTAGTTAATACACCTACAAATAATAGTAATAATGTTATTCAACAAATATTCCCTATTACTACAAATGATAATGCTATACAACAAGCATATAGGGTTGTTACAGGGAATACGGCAGGTAAATGGGTTTATTTAAAAGGTAATATAGACGGTAAGACACAAAGCATTAGTAACCAAAACTTAAACACATTTATGGCAGTGGGACATTATATGGCTTATAATTGTACAAATATGCCTAGTGGAGAGAGTGAGGGATTACTTAAAGTATACCGTTCGGATATGGGGACTATAGTACAAGAATTTATATCTACAAAAACAAATAGTAGATATCATAGAACTATAGGTACTAATGAAAACTTAAGTTGGATTAAATCCTTAGAACTAGGGGATACATTTAAGTATGGTTTAGGTAATAGCACAAGTAATGGTGATGTTACTTTTGGATTACTAATATATACAAGTGATAATAAGACATTCCAACAGGCTATAACAGACCATATAGCAAAGACAGGACAACCAACATTTACGTTTTATGTTCAAGGTGGTGTTACTGGGAACCCATTAGGTACCCTTAGTGGTAGGGGTATATTTGTATGTGAGTCTACTAGTGAAAGTGCATTAGCTAATAATTTATATGGTATATATCATGTAGTATCTACACTTGGTACATTAATTACCGGCTCTGTAATTGGTGGTGATTGGCGTATACCTAAGGGTTCAGATTCCACTACTACTATGTGGTCAGGGGTCAAAGAGTTTACAAGCAAAACAACGGAAAAAATGAACTATTCATCTAATGACTTTGACTATTTTAAAGTATATGTTACAATCGGTGGGGTTAATAATAACTCTATCTATAGACAAGGATTTGAATTTGGAAAACATAGTGCTAATAAATATAAAGTCTCTAGTGTAAACGTACCATCAAGTGGAACTACCTTAGAGTACTTTATGTGCTCAATATCATTTGACGGTGATAAGTTTACAATAGATGAATATAATACTAAAACAAATGGTAAATGCTATGTAACAGAAATAGTAGGTCTAAAGAGACCCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f7f8ce30f550921112ca213a201f9d94d86d89be1a117b18323d6a02744a3cf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank