Protein

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Genbank accession
XDJ02115.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MTCSNKPNYTPFKLQGLAPTKQWGLGRSASYERFNPSEFHALEDEVKITFPVDFRGKVKGSNTPNPSRGFSHASQIYRENVLRGSQFLSKPSLLFNGAVYNEKTVYNGAMVASTQEVNQGLMFYWEDFINPDPRIKEGDMVTFSVDVRSTGEDIPTGAVAFKGTSNFEEYYKVLEQPITKEFTRVSFTTRFLSKDWEWDEAFGMFWGVENVPVTDYPMFQYDKDKLVGFIQAQESVQLEFSRPMVSTIGKTAYIESGDDMFSNNKWDWSKAVSKGRLNEFDGKYNTNGIKQDWAMPEFIPIFKGSERIHFYKKTTLTETTDAGHGYGKILFYSAANEDSYMNVYKKFPHEAGVYGGYAAEVEVPIGATHYRVHITSERGKATTEAYVQSSANDWSEFSQEWYDGLSGKLDGKTARAETFYRKEMVEMEFELHFAEAVQKALPDIFKGLTTDAEKQQRLRDIAYQFDSTMIARGRGQGNNLADWIFYRWAPDGSIEEQTMKQFRGEGLTSVTHPSSYQEWINPQGRIVTSLRSNRIIPNSMYMGTDTLSGKYDPKLTTLQLEVNGELVDKKATLDKTSEVFTFTGLKGFLKPEDKVRIAGWINRNNQWSITYSNVLMGNTPENVAEFNERAFVEADYLVTNMSIIVTQSQMDEWGFNPNLPDYRIESLERPASRTEEYMINSMVQVTHAYDIYGFVESNYPEFFGDCYTFDDRIRKINERIKQFNLVATTYSEEPWEAGNPTIFISAEANNPDRDYDVKAEINQTVELQINNSKGHFIHPNGYIYVGFARMPRSDRETGISVDSELSFEFTMDRQYDSLPRVFRYNYQKQPWFLFVRNINRSVLAPKVNSLTPINGGTRRYNFGASEDARYISMDCFIKAPAEEDMPKLMEELADFLDVGETVIQFSDNKDRYYKVMLDGSTDLSQTLHVGTLTLTFVLLENTAIGEEVVESFDIDSTTGSVPFIELENMGTADAYPTYQLTFEEPVGYVDLIGTDTSANVSIGRRPKDNEDEVKVDLRPRKFYSKFTSTDGAGWTAMNDTHLPQIEGYQTKLQGTVQRVNGMANQDKWNYGDTSHRGWHGAGIIANLQKNLDDFYMEASIVATGKPVKTSANAIFLIFYDENNTPYAYTKVGTRPQEGNLDSYVAYAGDWGKRKVVNNGAKWKDFWGKVSVQRRDNRWRLIVGQYKDRRYSPSPEASFNFGQNMLKDTRDTGWFDLPPETWGKKFARVGIFFGQYSHRPKLGHLSVRRLIVWENLEEYGETPLEGTPIMFHEGDTVVIDSSKAQTYLNGELTPSLVDPMTDWFPITKGDNYIGVNNFKGKIDIVYNERFK
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 152114,16560 Da
isoelectric point:5,19386
aromaticity:0,13083
hydropathy:-0,58617

Domains

Domains [InterPro]
DC_0142
STR
1–822
DC_0142 IPR006520 G3DSA:2.60.120.860
DC_0077
STR
691–1330
DC_0077
G3DSA:2.40.30.200
ATT
820–940
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
860–937
IPR008841
XDJ02115.1
1 1330
Architecture
STR
ATT
STR
STR 1-819 | ATT 820-940 | STR 941-1330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ02115.1
1 1330
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,8282
Central domain 17 246 231 0,5724
C-terminal 247 1330 1083 0,2079
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-246
C-terminal
247-1330

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage PMBT56
[NCBI] 		3229530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ02115.1 [NCBI]
Genbank nucleotide accession
PP944851 [NCBI]
CDS location
range 8114 -> 12106
strand -
CDS
ATGACCTGTTCTAATAAACCTAATTATACACCTTTTAAATTACAAGGTCTAGCCCCCACTAAGCAGTGGGGATTAGGCCGTTCTGCAAGTTATGAACGATTTAACCCAAGCGAGTTCCATGCGCTAGAGGACGAAGTTAAGATTACATTTCCAGTAGACTTTAGAGGAAAGGTTAAAGGAAGCAATACACCTAACCCTTCACGAGGATTTAGCCACGCTAGTCAAATCTATCGTGAGAACGTGTTAAGAGGTAGCCAATTCCTTTCTAAGCCTTCTTTGCTTTTTAATGGAGCTGTATACAATGAGAAGACAGTCTACAATGGAGCTATGGTTGCTTCTACTCAAGAAGTTAATCAAGGCTTGATGTTCTATTGGGAAGACTTTATCAATCCTGACCCAAGAATTAAAGAAGGGGATATGGTAACCTTCTCAGTTGATGTACGAAGCACTGGGGAAGATATTCCGACAGGGGCTGTGGCCTTCAAAGGGACTTCTAACTTTGAGGAATACTATAAAGTCCTTGAACAGCCTATCACAAAAGAGTTTACAAGAGTATCTTTTACTACACGATTCTTGTCTAAGGACTGGGAATGGGACGAGGCTTTTGGAATGTTCTGGGGAGTAGAGAATGTTCCTGTTACAGACTATCCAATGTTCCAATATGACAAGGATAAGTTAGTTGGTTTTATTCAGGCTCAAGAAAGTGTTCAACTAGAGTTCTCACGGCCTATGGTTTCAACTATCGGAAAGACTGCTTACATTGAGTCTGGGGACGACATGTTCTCTAACAACAAATGGGACTGGTCTAAAGCCGTATCTAAAGGCCGTTTAAATGAATTTGATGGTAAGTATAACACAAACGGAATCAAACAAGACTGGGCAATGCCTGAGTTCATTCCTATTTTCAAAGGCTCTGAGAGAATCCACTTCTACAAAAAGACTACCTTAACGGAAACAACTGACGCTGGACATGGCTATGGTAAAATCCTATTCTACAGCGCTGCTAACGAGGATTCTTACATGAACGTATATAAGAAGTTCCCTCACGAGGCTGGTGTATATGGTGGATACGCAGCTGAAGTAGAAGTGCCTATCGGAGCTACTCACTACCGTGTTCATATAACTTCAGAAAGAGGAAAGGCCACTACAGAAGCCTATGTACAATCTTCTGCTAACGACTGGTCAGAGTTTAGTCAAGAGTGGTACGACGGACTGTCAGGAAAGCTAGATGGAAAGACTGCCAGAGCTGAGACATTCTATCGTAAAGAAATGGTTGAGATGGAGTTTGAGCTACACTTTGCAGAAGCTGTACAGAAAGCTTTACCAGACATCTTTAAAGGCCTTACTACTGACGCTGAGAAGCAGCAAAGACTTCGTGACATTGCTTATCAATTCGATTCAACAATGATTGCACGAGGCCGTGGCCAAGGCAATAACTTAGCTGATTGGATTTTCTATAGATGGGCTCCTGACGGCTCTATTGAAGAGCAGACAATGAAACAGTTTAGAGGTGAGGGATTAACTTCAGTTACCCATCCATCAAGCTATCAAGAGTGGATTAATCCACAAGGTAGGATTGTAACATCTCTTCGCTCTAACCGAATCATTCCTAACTCAATGTACATGGGAACTGATACGCTAAGCGGTAAGTATGACCCTAAATTAACAACGCTTCAGCTAGAAGTTAATGGGGAGCTTGTTGATAAGAAGGCTACCTTAGATAAGACCTCAGAGGTATTTACATTTACAGGTCTTAAAGGATTCTTAAAGCCTGAAGATAAAGTTAGGATTGCTGGATGGATTAATCGTAACAACCAATGGTCAATCACCTACTCTAATGTTCTTATGGGAAACACTCCCGAAAACGTTGCTGAGTTTAACGAACGAGCTTTCGTCGAAGCTGATTACCTAGTTACAAACATGTCTATTATCGTAACTCAATCACAGATGGATGAATGGGGATTTAACCCTAATCTACCAGACTACCGAATTGAATCATTAGAACGTCCAGCAAGTCGTACTGAGGAGTATATGATTAACTCAATGGTACAGGTAACACATGCTTATGACATCTACGGTTTTGTTGAAAGTAACTACCCTGAGTTTTTCGGTGACTGTTACACGTTCGATGATAGAATAAGAAAGATTAATGAACGCATCAAGCAGTTTAACTTAGTGGCTACTACTTATTCAGAAGAGCCTTGGGAAGCAGGTAATCCTACAATCTTCATTAGTGCGGAAGCTAATAATCCCGACAGAGACTACGATGTTAAAGCAGAGATAAACCAAACAGTTGAACTACAAATTAACAATTCTAAGGGACACTTTATCCATCCTAATGGTTATATATACGTGGGATTTGCAAGAATGCCTAGAAGCGACCGTGAGACTGGAATATCCGTTGACTCTGAGTTAAGCTTTGAGTTCACGATGGATAGACAGTACGACAGCCTTCCAAGAGTATTCCGCTACAACTACCAGAAACAGCCTTGGTTCTTGTTTGTAAGAAACATTAACAGAAGTGTTCTTGCGCCTAAAGTAAACTCTCTAACTCCTATCAATGGAGGAACTAGACGTTACAACTTTGGAGCTTCAGAAGACGCTCGGTATATCTCAATGGACTGCTTTATCAAAGCTCCTGCTGAAGAGGATATGCCTAAGTTGATGGAAGAGCTTGCTGACTTCCTAGATGTTGGAGAAACGGTAATCCAATTCTCTGATAACAAAGACCGTTACTACAAGGTTATGTTAGATGGCTCGACAGACCTTTCTCAAACGCTTCATGTAGGAACGTTGACACTGACTTTCGTACTGCTTGAGAATACAGCCATCGGTGAAGAGGTTGTAGAAAGCTTTGACATAGACAGCACGACAGGATCAGTTCCATTCATTGAGCTTGAGAACATGGGTACGGCAGACGCTTACCCAACCTACCAACTGACCTTTGAAGAGCCTGTAGGATATGTTGACCTAATCGGTACCGACACCTCAGCCAACGTGTCAATTGGAAGACGTCCTAAAGACAATGAAGACGAGGTTAAAGTAGACCTTCGCCCACGTAAATTCTACAGTAAGTTTACCTCTACTGATGGAGCTGGTTGGACGGCCATGAATGACACTCATTTGCCACAGATTGAAGGATACCAAACTAAGCTCCAAGGAACTGTTCAAAGAGTTAATGGAATGGCAAATCAAGACAAGTGGAACTATGGTGACACTAGCCACAGAGGCTGGCATGGAGCTGGTATCATAGCTAACCTTCAAAAGAATCTTGACGACTTCTATATGGAGGCTTCCATTGTAGCTACAGGAAAACCAGTTAAGACTTCTGCCAATGCCATTTTCTTGATATTCTATGATGAGAACAATACTCCATACGCTTATACTAAAGTTGGTACACGGCCTCAAGAAGGTAACTTAGATAGCTACGTAGCTTATGCTGGTGACTGGGGTAAACGTAAAGTGGTTAACAACGGAGCTAAGTGGAAAGACTTCTGGGGCAAGGTTTCAGTACAACGTAGAGACAATCGCTGGAGACTTATCGTAGGCCAGTACAAAGACCGTAGATACAGCCCTTCACCTGAAGCTTCATTTAACTTTGGTCAAAACATGTTGAAAGATACTAGAGACACAGGCTGGTTCGACTTACCTCCAGAAACTTGGGGTAAGAAGTTTGCAAGGGTTGGAATCTTCTTCGGACAGTATTCACATCGACCTAAGCTAGGCCACTTATCAGTACGTAGACTAATTGTGTGGGAAAACCTTGAGGAGTATGGAGAAACTCCTTTAGAAGGAACTCCAATCATGTTCCATGAAGGTGACACAGTTGTAATTGACTCAAGCAAAGCTCAAACATACCTTAACGGAGAGCTTACTCCATCACTTGTAGACCCTATGACCGACTGGTTCCCAATTACCAAAGGTGATAACTACATTGGAGTAAACAACTTCAAAGGCAAGATTGACATAGTATATAACGAACGATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
676976925e54e6d5148674f72aaf9f2afb073670a0430423be0316f4ec721bff
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6755
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank