Protein

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Genbank accession
AUS02789.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKTFPLQSDMLNAYLAENVSAGVVITTLGGTAINDGEGATWVTTGNVIPGNAGTIVNDKAYDQRGNELSAFVTVNNSEAISLKSFGVVGDGVTDDTAGITAAILAAEGKTLYIPEGDYNYYNDYTRDAINVSNITIHCDGFIITPRGLRLEGDSITIIGGKYGRTDKSTNTNTNYECGIAVVGNYNSISKIECLNVDGPGLIFTGTFGHIDQCHLHDNQMGALMGSACSHVTVENCNIHNNDVTNNSGADGLNIQRNTDNITVRNNRIYENGEHGVYFQGMRSQFLGNEVYRNHSAGIKFGSHPTGQAPKEIMLPISGDLGDGIIEQQGGHTILIEGNSCYDNPGDNIYIQPSFKHVEICNNRCWNTNIETVPVHDGIKLTYFSGEGETDELEELRDIKVYGNSLIDCNIFSECNGTEIFDNYVEGSITLSASDGGKTGQVNNLTWHRVSRNVVKYRSDGGGGIILWNRSDNGCIAEDNDIMSFVTGGGERDSINLKGNLIRELQDSIDFTRFNTFDGNEVHIVGNIALNRGDISFGFSNSFSGNRIFGPDRTDNHVISASFNSTTSDYGIFSDNYIYAPQADRTIYMWGDNVTVTGNVLENPGASIAIDYYGNGGTFSGNNALSGYLNLREDGSTFASGNNFWTNNQDTAGARFMTNMSVGNNKDIQQDTSAPTSRPEFIGQMFIDTTAGNVYISVDNDASGVPGGWKLVTN
Physico‐chemical
properties
protein length:713 AA
molecular weight: 77067,59000 Da
isoelectric point:4,54174
aromaticity:0,08836
hydropathy:-0,36732

Domains

Domains [InterPro]
IPR011050
STR
73–367
IPR011050 DC_1090
IPR012334
STR
79–307
IPR012334 IPR012334 IPR006626 IPR006626
IPR012334
STR
80–307
IPR012334 IPR006626 IPR006626
IPR039448
ENZ
175–302
IPR039448
IPR006626
Unmapped
228–256
IPR006626 IPR006626 IPR006626
AUS02789.1
1 713
Architecture
STR
RBD
STR 73-515 | RBD 516-712 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02789.1
1 713
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,9793
Central domain 95 654 561 0,9906
C-terminal 655 713 58 0,9472
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-654
C-terminal
655-713

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02789.1 [NCBI]
Genbank nucleotide accession
MG592671.1 [NCBI]
CDS location
range 124159 -> 126300
strand +
CDS
ATGAAAACATTTCCTCTTCAGAGTGATATGCTAAATGCGTATCTTGCTGAAAATGTTTCTGCAGGCGTAGTAATTACTACACTTGGTGGAACTGCTATTAATGACGGAGAAGGTGCAACGTGGGTTACTACAGGAAATGTTATTCCTGGTAATGCAGGCACTATTGTAAATGACAAAGCATACGACCAACGTGGTAACGAACTTAGTGCATTTGTCACAGTTAATAATTCTGAAGCAATAAGCCTTAAATCATTTGGGGTAGTTGGCGATGGTGTTACAGATGACACAGCTGGTATCACTGCGGCAATATTAGCCGCAGAAGGTAAGACTCTCTACATACCAGAAGGGGATTATAATTACTATAACGACTATACTAGGGATGCAATCAACGTTAGTAATATAACTATTCATTGTGATGGTTTTATTATAACTCCTAGAGGGCTGCGACTAGAAGGAGATAGTATAACAATTATCGGAGGCAAATACGGAAGAACTGATAAGTCAACAAACACAAACACAAACTATGAATGTGGTATAGCTGTGGTCGGTAACTACAACAGCATTTCCAAAATTGAGTGCTTGAATGTTGATGGTCCAGGATTAATATTTACTGGGACTTTTGGCCACATTGATCAATGTCACTTGCACGACAATCAAATGGGCGCATTGATGGGAAGTGCTTGTTCTCATGTTACCGTCGAAAACTGTAACATTCATAATAACGATGTTACTAATAATTCAGGCGCTGACGGCCTAAACATTCAACGAAATACTGATAACATCACTGTTAGAAATAACCGTATCTATGAAAATGGCGAACATGGAGTTTACTTCCAAGGGATGCGATCGCAGTTTCTAGGAAATGAAGTCTATCGTAACCATAGCGCTGGTATTAAATTTGGATCTCACCCAACTGGTCAAGCACCAAAAGAGATTATGCTGCCAATATCAGGTGACCTAGGAGACGGCATTATTGAGCAACAAGGTGGTCATACTATACTCATAGAAGGAAATAGTTGTTATGATAACCCAGGCGACAACATTTACATCCAGCCTTCATTTAAACATGTGGAGATTTGCAACAACCGTTGCTGGAACACAAATATTGAAACAGTTCCAGTACACGATGGCATTAAGTTGACATATTTTTCAGGGGAAGGGGAAACAGATGAGTTAGAGGAATTGCGTGATATTAAAGTATACGGTAATTCTCTTATTGATTGTAATATATTTTCTGAATGTAATGGTACTGAGATTTTCGATAATTATGTTGAAGGTTCTATAACTTTATCAGCTTCTGACGGTGGCAAAACCGGACAAGTCAATAATCTAACTTGGCATAGAGTATCAAGAAACGTGGTCAAATATCGATCTGATGGTGGTGGTGGTATTATTCTTTGGAATAGGAGTGATAATGGATGTATTGCTGAAGATAACGACATAATGTCTTTTGTTACTGGTGGCGGGGAACGAGATAGTATAAACCTCAAAGGGAACTTAATAAGAGAACTTCAAGACTCGATTGACTTCACACGTTTCAACACATTTGATGGAAATGAAGTACATATTGTAGGTAATATTGCACTAAACAGAGGTGATATAAGTTTTGGTTTCTCTAACTCATTTAGCGGAAATAGAATTTTTGGCCCTGACAGAACAGATAATCATGTTATTTCAGCATCATTTAATTCAACAACTAGTGATTATGGAATTTTTTCTGATAACTACATTTATGCTCCTCAAGCTGATAGAACAATCTATATGTGGGGTGATAATGTTACCGTGACCGGTAACGTACTTGAAAACCCAGGCGCTTCTATAGCTATTGATTATTATGGTAATGGTGGAACATTTAGTGGAAACAACGCGTTGAGTGGTTACTTGAACTTACGAGAAGACGGTAGCACATTTGCTAGCGGTAACAATTTCTGGACTAATAACCAAGATACAGCAGGCGCACGCTTTATGACTAATATGTCAGTTGGTAATAATAAGGATATACAACAAGATACATCAGCGCCAACATCAAGACCTGAGTTCATTGGTCAAATGTTTATTGATACTACAGCAGGAAACGTGTACATTTCAGTGGACAATGACGCATCTGGTGTTCCAGGTGGTTGGAAACTAGTAACAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9cc6ea4e2894bdec01228ee25e5d34edb9dda61b5cfad777515dfb393e5c8c35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank