Protein
View in Explore- Genbank accession
- BDU13741.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSPTF
- Protein sequence
-
MAKPIYYPDWAVETVTLPGTQNMNKIRPKEIIRTVGMDYGQIMTCEEMNWILNNNGLWIRYLVDEFLPTLPNTYLPLVGTKITMAGDATGEVTWNGNAAVTLSIQVVDNSHNHLSSNITDATSTTVTPNVLVKRDGGGAIYAGDVYVNGTATSDPATIFFKNFAGQTNGEISSEYNNGGHLYIYRRNPTSGNVSCAVRLYDGGYVLIDNPRSNSGQDTGNGNALVRLDYLNSRLSSLQNTLQTNINSVQNNLNNVNNNLNSRIDSVNSNLQNQISNNYNYANGNFVRDIRYTSQGVYYPPGNEVSWTYICSSGYVLSGIIVQETGRSSADNIGGVYFKRLQRNVNGNWYDIGG
- Physico‐chemical
properties -
protein length: 353 AA molecular weight: 38858,53550 Da isoelectric point: 5,42036 aromaticity: 0,09632 hydropathy: -0,41048
Domains
Domains [InterPro]
DC_0413
STR
1–350
STR
1–350
Coil
Unmapped
238–276
Unmapped
238–276
1
353
Architecture
STR 1-350 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
353
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 240 | 240 | 0,5923 |
| Central domain | 241 | 342 | 103 | 0,3050 |
| C-terminal | 343 | 353 | 10 | 0,9971 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-240
1-240
Central
241-342
241-342
C-terminal
343-353
343-353
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage phiWec190 [NCBI] |
2992786 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
BDU13741.1
[NCBI]
Genbank nucleotide accession
LC739539.1
[NCBI]
CDS location
range 73574 -> 74635
strand +
strand +
CDS
ATGGCGAAGCCAATTTACTATCCTGATTGGGCTGTAGAAACAGTTACCCTCCCAGGAACACAAAACATGAACAAGATTCGACCTAAAGAAATCATTCGTACCGTGGGTATGGATTATGGTCAAATCATGACATGTGAAGAAATGAACTGGATACTCAACAATAACGGATTATGGATTCGTTACTTGGTTGATGAATTCCTTCCAACATTACCAAATACATATCTTCCCCTGGTTGGTACTAAGATAACAATGGCAGGGGATGCAACAGGCGAAGTAACCTGGAACGGGAATGCAGCAGTAACGCTTTCTATTCAAGTTGTAGACAACAGTCACAACCACTTATCCTCTAACATCACAGATGCAACAAGCACCACAGTAACCCCTAATGTATTGGTTAAACGTGACGGCGGCGGCGCTATTTATGCTGGAGATGTTTACGTAAACGGTACAGCTACTTCAGATCCTGCTACAATATTCTTTAAAAACTTTGCAGGGCAAACTAACGGAGAGATTTCTTCCGAGTACAATAATGGCGGTCATCTTTATATATACCGCAGGAACCCTACCAGTGGTAACGTATCCTGTGCAGTGCGTTTATATGATGGCGGTTATGTTCTGATTGATAATCCACGATCTAATAGTGGACAAGATACTGGGAACGGTAATGCTCTGGTTCGTTTAGATTACTTGAACTCACGTTTAAGCTCTTTACAGAACACCTTGCAAACGAATATTAACTCTGTTCAAAACAACCTGAACAACGTTAACAATAACTTGAACTCACGTATTGACAGCGTGAACAGTAACTTGCAAAACCAGATCAGTAACAACTATAACTATGCGAATGGTAATTTTGTTCGTGACATACGTTATACCAGCCAAGGCGTATATTACCCACCAGGTAACGAAGTGTCTTGGACATATATTTGTTCTTCCGGCTATGTTCTTTCTGGTATTATTGTTCAGGAAACAGGTCGTAGTTCTGCGGATAACATTGGTGGTGTTTACTTCAAACGTCTCCAGCGAAACGTGAACGGAAACTGGTACGATATTGGAGGCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
2dc9f32f05813b63ae8a5ea19f3e17ff534fb1f90a83dbc8f7c672010f3aea7e
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50